Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01458 ATGATTAGGGTTTGTTGCTATTGGTTTGCATTTCTGGCTCTCTTTCTGGGTTCGGAATTGGTTGTGGGAAATGATCAGTTTGCTGCAAGACGAGGGAATAAAGTGATCCCTTACCGTACAATCATGGTAGATCAAACTGGGTGGCGAGGAAACTTTTCCAACATACAATCTGCTATAGATTCCGTCCCTTCCAATAACAGGCACTGGGTTTGCATCAAGGTCAGGGCTGGAACCTATAGggaaaagttgaaaattccTTACGACAAGCCTTATATCATCCTTTTAGGAGAGGGAATGAGAAGAACGCTTGTCGTTTGGGATGACCATGGAAAACTTTCAGAGAGCCCCACATTGGAATCAATGGCAAATAATGTTGTGGTCAAATTCATTAGTTTCAGGAATTCATACAACAACCCAATAAACAGGAATCCCAGGACCCAAGCAGTAGCTGCGAGGATAGGAGGTGACAAGTCTTACTTCTACAATGTCGGCTTCTTTGGTTTACAGGACACTTTGTGGGATGACCATGGAAGACATTACTACGAACTCTGCACCTTTCAAGGTGCCGTTGATTTCATCTTTGGCAATGGACAATCAATATTTGAGacATGTTCGATATCGGTTATTGGTCCTGGATTCATCACAGCACAAGCAAGGTCGAGTCCACATGATACGAGTGGGTTTGTGTTTAAGAATTGCAATATATTTGGAAATGGGACAACTTACTTGGGAAGACCATGGAGGTCTTATGCTAGAGTTGTCTTCTATAATACCAAAATGTCCAACATTGTCCAACCCAAGGGATGGCACCCATCGCGTTCCATTGGCCATGAGTA 836 0.4234 MIRVCCYWFAFLALFLGSELVVGNDQFAARRGNKVIPYRTIMVDQTGWRGNFSNIQSAIDSVPSNNRHWVCIKVRAGTYREKLKIPYDKPYIILLGEGMRRTLVVWDDHGKLSESPTLESMANNVVVKFISFRNSYNNPINRNPRTQAVAARIGGDKSYFYNVGFFGLQDTLWDDHGRHYYELCTFQGAVDFIFGNGQSIFETCSISVIGPGFITAQARSSPHDTSGFVFKNCNIFGNGTTYLGRPWRSYARVVFYNTKMSNIVQPKGWHPSRSIGHE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01458 278 Gene3D - 37 277 IPR012334 -
Bva10g01458 278 Pfam Pectinesterase 49 271 IPR000070 GO:0030599|GO:0042545
Bva10g01458 278 PANTHER PECTINESTERASE 10-RELATED 29 278 - -
Bva10g01458 278 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 278 - -
Bva10g01458 278 SUPERFAMILY Pectin lyase-like 37 272 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01458 Bva-Chr10 10047946 10049168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01458 39 278 Carbohydrate Esterase AT2G19150 43.145 6.02e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01458 - - gmx:100819252 371.318