Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01441 ATGGCGGGCGTATCTCTCAAGTGTGGAGACTGTGGAGTTCTATTGAAGTCCGTAGAAGAAGCTCAGGAGCACGCCAAGCTCACCTCCCACTCTAACTTCTCCGAATCTACTGAAGCAGTTCTTAACGTTGTTTGCACTACTTATGACAAGCCATGCCGATCAAAAACCCTTTCATTTGTTTTGAGGGTCAATACGGGATGGTTCCAAAGGGAGAGGCAGCATTATAAGAGGCTGGGGATGCAACTACTGACCAGAATGAAGGTACCTGCAAATGCTAAAGTCGAGGCTCCTAAACCTTCTCTTACACCAGAACAATTGAAGGCCAAACAGCAAGAGGCCAGGTTGGTTGAGATTTATTCTGCGAAAATGCTGGCTTCTTTCATGGAGGAAAGCACTCCTGAAAGAGctaaatatttatcttctttagAACACAAGTATTATCCTAAAggAGAAGGCTCGCAAGAAGAAAGACGAGGAAGAGAAGAGGATggagagagaaatagaaaagGAGACAATTCTGTGGGCAAGGAGTTGTTAGAAGCAAAGAGGattgaagaagagaatgagagaaaaagTTTGCTAGCTTTGCAAAAAgcagagaaagaggaagagtGGAAGGccagagagaaaataaggcaGAAATTGGAAGAAGATAAGGCAGAAAGAAGGCGAAGACTTGGATTGCCTCCAGAAGTACATTCAACTGCTAAACCTTCGACTGTTGTGGAGGTGAAAAAGGAGAGAGTTGGTTCTTTGAACGGGGGCATTCAGTTCCTGGAGATCTGTGGCTTTGAGAAAATTGATGGTggtgagtttttatttttgcggAGGGACAAGGTTGACATGACAGTTCTGAATTCCGCTGGGTCTGAACTGGACTCTGCAACTAAAAATCCCTTTTTCGGAGTTCTTTA 914 0.3895 MAGVSLKCGDCGVLLKSVEEAQEHAKLTSHSNFSESTEAVLNVVCTTYDKPCRSKTLSFVLRVNTGWFQRERQHYKRLGMQLLTRMKVPANAKVEAPKPSLTPEQLKAKQQEARLVEIYSAKMLASFMEESTPERAKYLSSLEHKYYPKGEGSQEERRGREEDGERNRKGDNSVGKELLEAKRIEEENERKSLLALQKAEKEEEWKAREKIRQKLEEDKAERRRRLGLPPEVHSTAKPSTVVEVKKERVGSLNGGIQFLEICGFEKIDGGEFLFLRRDKVDMTVLNSAGSELDSATKNPFFGVL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01441 304 MobiDBLite consensus disorder prediction 147 177 - -
Bva10g01441 304 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Bva10g01441 304 PANTHER F13M7.16 PROTEIN 87 246 - -
Bva10g01441 304 Pfam PUB domain 246 281 IPR018997 -
Bva10g01441 304 PANTHER F13M7.16 PROTEIN 87 246 - -
Bva10g01441 304 SUPERFAMILY PUG domain-like 246 300 IPR036339 -
Bva10g01441 304 Coils Coil 176 204 - -
Bva10g01441 304 Gene3D - 243 295 - -
Bva10g01441 304 PANTHER F13M7.16 PROTEIN 1 79 - -
Bva10g01441 304 PANTHER F13M7.16 PROTEIN 246 304 - -
Bva10g01441 304 PANTHER F13M7.16 PROTEIN 1 79 - -
Bva10g01441 304 PANTHER F13M7.16 PROTEIN 246 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01441 Bva-Chr10 9947910 9952280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01441 87 304 C2H2 Transcription Factor Family AT1G04850 34.375 2.04e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01441 K24348 - sind:105158671 169.859