Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01418 ATGTTTTCAAGCGTTCCTAAAGCTGATGCTGTCTTTCTTAAGTGGATTTTGCATGATTGGGGAGATGAAGAGtgcatcaaaattttaaggaaaTGTAGGGAAGCTATCccagaagaaaatggaagggtTATAATTGTTGATGCTGTGATTGATGAAGATGGTAACAATGAGGACAGGTTTAAGGATGTGAAGTTGATGCTAGACATGGTAATGATGGCTTATACTACAACAGGCAAAGAGAGGACACTGAAGAAATGGGACTACGTCATCAAAAAGGCTAGATTCAGCAGATACACTGTCAAATCCATTCATGCCATGCAGTCTGTGATTATGTGGATTTTGCATGATTGGGGAGATGAAGAGTGCATCAAAATCTTAAGGAAATACAGAGAAGCTATtccaaaggaaaatgaaagggTTATAATTGTTGATGCTGTGATTGATGAAGATGGAAATAATGAGTACAGGTTCAAGGATGTGAAGTTTATGCTAGACATGGTAATGATGGCTCATACTACAACAGGCAAAGAGAGGACACTGAAGGACTGGGACTACGTCATCAAAGAGGCTGGATTCAGCAGACACACTATCAAATCCATTCATGCCACGCAGTCTGTGATTATGGTTTTTccttg 635 0.3575 MFSSVPKADAVFLKWILHDWGDEECIKILRKCREAIPEENGRVIIVDAVIDEDGNNEDRFKDVKLMLDMVMMAYTTTGKERTLKKWDYVIKKARFSRYTVKSIHAMQSVIMWILHDWGDEECIKILRKYREAIPKENERVIIVDAVIDEDGNNEYRFKDVKFMLDMVMMAHTTTGKERTLKDWDYVIKEAGFSRHTIKSIHATQSVIMVFP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01418 211 Gene3D Vaccinia Virus protein VP39 1 110 IPR029063 -
Bva10g01418 211 Gene3D Vaccinia Virus protein VP39 111 211 IPR029063 -
Bva10g01418 211 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 110 211 IPR016461 GO:0008168
Bva10g01418 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 207 IPR029063 -
Bva10g01418 211 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 114 IPR016461 GO:0008168
Bva10g01418 211 PANTHER O-METHYLTRANSFERASE 105 205 IPR016461 GO:0008168
Bva10g01418 211 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 1 105 - -
Bva10g01418 211 PANTHER O-METHYLTRANSFERASE 1 105 IPR016461 GO:0008168
Bva10g01418 211 Pfam O-methyltransferase domain 109 193 IPR001077 GO:0008171
Bva10g01418 211 Pfam O-methyltransferase domain 1 96 IPR001077 GO:0008171
Bva10g01418 211 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 105 205 - -
Bva10g01418 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 110 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01418 Bva-Chr10 9832210 9836995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01418 112 207 Monolignol Biosynthesis Gene Families AT1G77520 36.458 3.71e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01418 K22588 - rcu:125370897 235.343