Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01415 ATGTTTTCCAGCATTCCTAAAGCCGATGCTGTCTTTCTTAAGTGGATTTTGCATGCTTGGGGAGACAAAGAGTCCATCAAAATCTTAAGGAAATGCAGAGAAGCTATTCCAAAGGAAAATGGAAGGGTTATAATTGTTGATGCTGTGATTGATGAATTTGGAAATAATGAGGACAGGTTTAAGGATGTGAAGTTGATGATAGACATGGTAATGATGGCTCAAACTACAACAGGCAAAGAGAGGACACTGAAGGAATGGGATTACGTCATCAAAGAGGCTGGATTCAGCAGATACACTGTCAAATCCATTCATGCTATGCAGTCTGTGATTATGGTTTTTccttg 344 0.3866 MFSSIPKADAVFLKWILHAWGDKESIKILRKCREAIPKENGRVIIVDAVIDEFGNNEDRFKDVKLMIDMVMMAQTTTGKERTLKEWDYVIKEAGFSRYTVKSIHAMQSVIMVFP 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01415 114 Pfam O-methyltransferase domain 1 96 IPR001077 GO:0008171
Bva10g01415 114 Gene3D Vaccinia Virus protein VP39 1 114 IPR029063 -
Bva10g01415 114 PANTHER O-METHYLTRANSFERASE 1 109 IPR016461 GO:0008168
Bva10g01415 114 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 114 IPR016461 GO:0008168
Bva10g01415 114 PANTHER BNAANNG10770D PROTEIN 1 109 - -
Bva10g01415 114 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 111 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01415 Bva-Chr10 9812219 9812804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01415 1 110 Monolignol Biosynthesis Gene Families AT1G77520 39.091 4.01e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01415 K22588 - pvy:116143085 160.229