Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01408 ATGGCTACCATTTTCAGCTATTCCCAACCTCTTTTCCTGTTCTTctccttcatcttttactttctTCTCCATGCTAATTCTCTTAGCTTTCAAAAGCCTGGTTTTGATTCTAGTGATGCCAGCATAGTCTGTCTTGGATCTGCAGCACCTCGCGTTGGAGCAATTGAATTTAACGTATATGAATTATATACATGCCAAGCTGGATGGGCCATATATGCCGAAAAATTGAGGCTGTGGGATTCAAACACAGGAAAACTCGCTGACTTCACAACTCATTATTCCTTCATCATAAACACACAAGGCAATCCCCCAGGTGAATATGGCCATGGCATAGCCTTCTTCCTTGCTCCTGTTGGATTCCAAATCCCACCAAATTCAGATGGTGGCTTCCTGGGCCTATACAACACAACAACCGCTTACTCTTCCCAGAGCCAAATTGTTCATGTGGAGTTCGACTCTTACCCAAATCCTGAATTCAATGAGACATTTGAGCATGTGGGAATCAACAATCACTCCATTAGTTCATCTAATTTTACACAATGGAATGCTAGTCTGCATAGTGGTGATCTTGTATATGTATGGATCACCTACAACTCCACAACTAAGAGTTTAAGTGTATATTGGAAATACCAGAACACCTCCAACTCTCAAGAGAACACTTATCTTTCTTATCAAATTGATTTGATGGAGGTGCTACCTGAATGGGTCACAGTTGGTTTTTCCGCTGCAACAGGTTCCCTTGGAGAACTCAATTATCTTCAATATTGGGAGTTCAATTCAACACTGGATGCAAATGgagaagaacaaaagaatACAAAGTTAGTGGTGATTCTTACTGTTGTAGGCAGTGTTTTCATAGTATCAGTGGGAGCTGCTGCCTACGCGTTACTATGGAGGAGGAGGGACAAAAGGAAGAGCAATAATGAAGAAGCTAACCTAACATCAATCAATGATCACCTTGAAAGAGAAGCAGGGCCAAGAAGGTTTTCTTACAAAGAGCTTGTTGTGGCCACCAACAACTTCTCCAGAGACAGGAAGTTAGGTCAAGGGGGGTTTGGTGCTGTGTACAGAGGTTACTTTGCTGATTTAGATTTGGCAGTTGCTGTGAAGAAAATCTCAAGGAGCTCtaaacaaggaaaaagagagTATATAACCGAGGTAAGGGTGATCAGCCGATTAAGACACCGAAACCTTGTGCAACTCATAGGTTGGTGCCATGATAAGGGTGagtttcttcttgtttatgaGTTCATGCCAAATGGTAGTCTTGATTCTCATCTCTTTGGTAAGAAGTCTCTTCTATCTTGGAGCTTGAGGTACAAGATAGCTCTTGGGTTGACTTCTGGGTTGCTCTATTTACACGAGGAATGGGAACAATACCATGAGATAGGACCACAAACAACAGGGTTGGCAGGAACTTTGGGCTATTTGGCTCCAGAATATGTGAGTTCAGGAAGGGCAAGTAAAGAATCAGATTTATATAGCTTTGGGGTGGTAACACTTGAAATTTCCACTGGAAGAAAGGCAGTGGATCTCATGGAGGGCAAAGATGGTGACAAGGGATTAATCGAATGGGTGTGGGATCATTATGGCAAAGGTCAACTGGTTATGGCCATGGATGAGAAACTGcaaaatgattttgatgaaaaacaAGCGGAATGcttgatgattctaggactgtGGTGTGCTCACCCAGATGCAAATTTGAGACCATCAATAAGACAGGCACTTCATGTCCTTAATTTTGAGGCGACTTTGCCAAAACTTCCACCAACCAAGCCTGTCCCGACCTATCTTGTTCCTACACCATCACTTAGCTCTGGAGAGGCTTCCATGAGTACAAGTCTTATTCAGATGGGTCGTTG 1865 0.4059 MATIFSYSQPLFLFFSFIFYFLLHANSLSFQKPGFDSSDASIVCLGSAAPRVGAIEFNVYELYTCQAGWAIYAEKLRLWDSNTGKLADFTTHYSFIINTQGNPPGEYGHGIAFFLAPVGFQIPPNSDGGFLGLYNTTTAYSSQSQIVHVEFDSYPNPEFNETFEHVGINNHSISSSNFTQWNASLHSGDLVYVWITYNSTTKSLSVYWKYQNTSNSQENTYLSYQIDLMEVLPEWVTVGFSAATGSLGELNYLQYWEFNSTLDANGEEQKNTKLVVILTVVGSVFIVSVGAAAYALLWRRRDKRKSNNEEANLTSINDHLEREAGPRRFSYKELVVATNNFSRDRKLGQGGFGAVYRGYFADLDLAVAVKKISRSSKQGKREYITEVRVISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKKSLLSWSLRYKIALGLTSGLLYLHEEWEQYHEIGPQTTGLAGTLGYLAPEYVSSGRASKESDLYSFGVVTLEISTGRKAVDLMEGKDGDKGLIEWVWDHYGKGQLVMAMDEKLQNDFDEKQAECLMILGLWCAHPDANLRPSIRQALHVLNFEATLPKLPPTKPVPTYLVPTPSLSSGEASMSTSLIQMGR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01408 621 Gene3D - 25 277 - -
Bva10g01408 621 Coils Coil 303 323 - -
Bva10g01408 621 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 264 IPR013320 -
Bva10g01408 621 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Bva10g01408 621 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Bva10g01408 621 Pfam Legume lectin domain 27 270 IPR001220 GO:0030246
Bva10g01408 621 ProSiteProfiles Protein kinase domain profile. 341 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01408 621 SUPERFAMILY Protein kinase-like (PK-like) 319 600 IPR011009 -
Bva10g01408 621 PANTHER PUTATIVE-RELATED 19 459 - -
Bva10g01408 621 PANTHER PUTATIVE-RELATED 461 621 - -
Bva10g01408 621 Pfam Protein kinase domain 342 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01408 621 Pfam Protein kinase domain 467 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01408 621 Gene3D Transferase(Phosphotransferase) domain 1 461 600 - -
Bva10g01408 621 Gene3D Transferase(Phosphotransferase) domain 1 418 460 - -
Bva10g01408 621 PANTHER - 19 459 - -
Bva10g01408 621 PANTHER - 461 621 - -
Bva10g01408 621 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Bva10g01408 621 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01408 Bva-Chr10 9777224 9779177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01408 12 621 Receptor kinase-like Gene Family AT5G10530 52.535 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva10g01408 Lectin_legB 1.7e-61 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01408 - - qsu:112006239 789.645