Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01397 atgaatgtTGAAAAGGATCTGGGAAGTGGGCTGAAGccaaatagagaaaagaaaaagaagcataagGAGAGGAAGAATAAGCATGAAAGTGATGAAGTTGCCAGTTTTAGTGAAATTTCTGAGGAAAATTGTAATGGTGAAGCAGCTGAGGCAAAGACTATCCCTAGTGAAGGGGATATGAAAATTATGATGAATGGGGAAAAAGAgagcaagagaaaaaagagaaagaaaggaaaggagggAAGGGATAACAATGACATAGCTAACGGTAACACTGCCATTGGTGAAGTTTCTGCTTTGAAACCAGAGCCTAATGCAGATAAAGTTTCCACTAAAGTTGTTGATACTGAAGTTGATCATGAAGACAGAAAGAAGAttaagaggaagaagaagaagttataTGAACAAGCCTCAAATGGAGATAATGTAGTGGCAGACACTGAACGAACTTCTAAACGAGTAACTTTCTCTGATAAAGTGGAGGTTCTGAATGATGGCTTAATCCGAGGGAAGAGATTTACACCTGAAGAAGATAAGAAGATTAAAGAGGCTGTTTTCAACTACATAGAGTCTCATGGTTTGGGTGATGAAGGCTTAAATATGGTTCTCCATTGTAAATCTCATAAACAAGTGAAAAATTGTTGGAAGGAAATTGGTGCATCTTTACCACTTAGGCCTTGGGTGAGTGTTTATTATCGTgctcatattttgtttgaaaggGATGAGAATCGTAAATGGACCCCTGAAGAGTATGAACTCATACAAAATTATCAGCAAAAACATGGATCTGATTGGAAAGTGTTGGCCGAAGCAATGGGGAAACATCGTATTCACGTAAAGGATACATGGCGTAGGTTAAAGGTACCTAAACAGAAGAAAGGGAACTGGTCCCAAGAGGAGtatcaaaatttgtttgatttagtgAACATGGATCTTCGTATGAGGGCTGAAGAGGAATATAGAAAATCAAAGCATGGTATGTTGCGGGATAATATACCTTGGGAGGCAATCAGTAGCAAGTTGGAAACTAGGTCCAATGCACATTGCTGCATAAAGTGGTATAGTCAATTAACATCGCCAATGGTCTCTGAAGGCATGTGGAGTGATACTGATGACTATCGTCTGCTAAATGCGTTATTTACTTTGGATGCTAGTTGCATGGAGGAGGTGGATTGGGACCATTTGCTTGAGCATAGGTCTGGTGATGTATGTAGGAAACGATGGAATCAGATAGTCCAGCATATTGGAGAGCATGGAAACAAGTCGTTTGCTGAGCAGGTGGAAATTCTTTCAAAGAGATATTGCCCTGACTTGGTGGAAGCTAGAGAAGCCTTTGACGGCAAACCTGTGGTTACATG 1358 0.366 MNVEKDLGSGLKPNREKKKKHKERKNKHESDEVASFSEISEENCNGEAAEAKTIPSEGDMKIMMNGEKESKRKKRKKGKEGRDNNDIANGNTAIGEVSALKPEPNADKVSTKVVDTEVDHEDRKKIKRKKKKLYEQASNGDNVVADTERTSKRVTFSDKVEVLNDGLIRGKRFTPEEDKKIKEAVFNYIESHGLGDEGLNMVLHCKSHKQVKNCWKEIGASLPLRPWVSVYYRAHILFERDENRKWTPEEYELIQNYQQKHGSDWKVLAEAMGKHRIHVKDTWRRLKVPKQKKGNWSQEEYQNLFDLVNMDLRMRAEEEYRKSKHGMLRDNIPWEAISSKLETRSNAHCCIKWYSQLTSPMVSEGMWSDTDDYRLLNALFTLDASCMEEVDWDHLLEHRSGDVCRKRWNQIVQHIGEHGNKSFAEQVEILSKRYCPDLVEAREAFDGKPVVT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01397 452 ProSiteProfiles Myb-like domain profile. 359 412 IPR001005 -
Bva10g01397 452 Gene3D - 247 286 - -
Bva10g01397 452 ProSiteProfiles Myb-like domain profile. 288 357 IPR001005 -
Bva10g01397 452 SUPERFAMILY Homeodomain-like 243 304 IPR009057 -
Bva10g01397 452 ProSiteProfiles Myb-like domain profile. 245 287 IPR001005 -
Bva10g01397 452 MobiDBLite consensus disorder prediction 1 91 - -
Bva10g01397 452 SUPERFAMILY Homeodomain-like 337 420 IPR009057 -
Bva10g01397 452 SMART sant 292 359 IPR001005 -
Bva10g01397 452 SMART sant 169 240 IPR001005 -
Bva10g01397 452 SMART sant 242 289 IPR001005 -
Bva10g01397 452 Gene3D - 287 362 - -
Bva10g01397 452 PANTHER GB|AAC33480.1 15 451 - -
Bva10g01397 452 Pfam Myb-like DNA-binding domain 246 304 - -
Bva10g01397 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 291 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01397 Bva-Chr10 9706603 9709555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01397 240 378 MYB Transcription Factor Family AT4G32730 29.577 7.86e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva10g01397 Myb_DNA-bind_6 1.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01397 - - aprc:113872850 513.842