Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01390 ATGGAATATCAAACCCAAAACCCCAAGAGAGAAACTGGTTTTCTCAAGAAAGCAATCAAATTCAAGGAGAAACAGAAACCCATCATCAACAATGGCAAGAACAAGTTTCTTGGGGTGAGACAAAGGCCTTCTGGGAAATGGGTAGCAGAGATCAAAGACACAACAAAGAAGATTAGAATGTGGCTTGGCACTTATCAAACAGCTGAAGAAGCTGCTCGAGCTTACGATGAAGCCGCTTGCCTCCTCAGAGGTTCAAATACTCGCACCAATTTCTCTACTCATGTTGCTGCTGATTCTCCCATTTCTCAGAAAATCAGAAACCTTCTTGATCAGAAAAGGGAAACAATTCAGAGCCAATCCACCATCTTACTTAGCACACAAGCTACTTCTAATCGTAGCAGTAGTGCCTTTAGTAGTATCACCCAAGATTGGTCTGCAGCTAGTGCTGAAGATAAGACTTTGCTTCAGGTTCAAAACCAATACACCCAAGTCTTGGATCATCCATATAGAACAGATATGATCAACTTCTCAATGGGTCATTTGCCTATAAATACACCAGAGTTTGATTGTTCTTGGCCATATTCTGTTGGGTTAGAGCAAATGGCTCCAGCACAAGAAGGGATAGAGCTACCAAAAAGGAGTTTATCAGAAGAGAGAGAGCTGATAGAATTTGAACAAATGAAGGTAGAAAGGCAACTGTCAGCCTCGCTATATGCAGTTAATGGAGTGAATGAGTTCAATGCGGAGGATGCGTGTGATGTCAATAATGCCTGCTGGGACTCTTATGCTCTGCACCACTTGTTCTGCCTCAGTTG 815 0.4245 MEYQTQNPKRETGFLKKAIKFKEKQKPIINNGKNKFLGVRQRPSGKWVAEIKDTTKKIRMWLGTYQTAEEAARAYDEAACLLRGSNTRTNFSTHVAADSPISQKIRNLLDQKRETIQSQSTILLSTQATSNRSSSAFSSITQDWSAASAEDKTLLQVQNQYTQVLDHPYRTDMINFSMGHLPINTPEFDCSWPYSVGLEQMAPAQEGIELPKRSLSEERELIEFEQMKVERQLSASLYAVNGVNEFNAEDACDVNNACWDSYALHHLFCLS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01390 271 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Bva10g01390 271 Pfam AP2 domain 36 84 IPR001471 GO:0003700|GO:0006355
Bva10g01390 271 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Bva10g01390 271 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Bva10g01390 271 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Bva10g01390 271 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Bva10g01390 271 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 15 253 - -
Bva10g01390 271 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Bva10g01390 271 Gene3D AP2/ERF domain 34 94 IPR036955 GO:0003700|GO:0006355
Bva10g01390 271 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 15 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01390 Bva-Chr10 9674940 9675755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01390 1 269 AP2-EREBP Transcription Factor Family AT5G19790 42.545 4.25e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva10g01390 AP2 9.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01390 K09286 - pop:7461361 217.624