Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01362 ATGGATTCCAAATATTCCACAGAGAATGGAGTCGGGAAAATCTGTCCTCAACTTTCAGAGGACGATGCTTGTCTCTCTGCTATGCTACTTTCTACAACTCAGGTATATCCCGCAGTGCTTAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCTAAGGCAACCCCACCATGCTTGTCTGTCTCTGAAATAGCTTCTCAGCTTCCAAACCAATACCCAGAATTGGCTTCGAGGCTTGAACGTGTGTTGCGTTTGCTTGCTAGTTACAATCTTCTTATTTGTTCTACGTGCACCATTGAAAACGGTAGCACCGAAAGAGTTTATGGACTATCAGAAATTGGTAAATACTTGATAACAGATCACGAGGGAGGCAACTTTGCATCATTTGCAATATTTCTTTCTCACAGAGCATTAATGGAGATTTGGCAAAATTTCAAGCAATCGGTTGCTGATGCTGGCAATGACCTATTTATGAAAGTTCATGGAGCTAACTCATACCAGTACTTTGAAAAAGATCCTACTctgaatcatatttttaacaaatcaatgGCAGATGTCTGCAGAACAGAGATGAATAGGatacttgaaatatataaaggaTTTGAAGGAGTTTCGACATTGGTTGATGTAGGAGGTGGAAATGGGGCTAATCTGAAGATGATTATCTCCAAGAACCCTTCAATAAAGGGAATCAATTTTGATCTGCCCCAAGTTATAGAACATGCAACACCATATCCAGGGATTAAGCACATTGGAGGAGATATGTTTACAAGCGTTCCTGAAGGTGatgctataattttaaagGCCGTATGCCATAATTGGGAAGATGAAAAGTgtgttgaatttttaataaattgtcACAAAGCTTTGCCACAAAATGGAAAGGTGATCATTGTGGAGTTCATTATGCCAGAATCTCCAGAACCAACTGATGCATCCAAATTTGTTTCCATTCTTGACAATCTAATGTTTATTACTGTTGGTGGGAAAGAGAGGACTGAGAAAGAATGGGAGAATTTGTGCAAGAGGTCTGGATTTTCCAAATTTCAAGTTGCCTGTCGTGCCTTTTCTGCTCTAGGAGTTATGGAGTTCTATAAATA 1103 0.3753 MDSKYSTENGVGKICPQLSEDDACLSAMLLSTTQVYPAVLNAAIELNLFEIIAKATPPCLSVSEIASQLPNQYPELASRLERVLRLLASYNLLICSTCTIENGSTERVYGLSEIGKYLITDHEGGNFASFAIFLSHRALMEIWQNFKQSVADAGNDLFMKVHGANSYQYFEKDPTLNHIFNKSMADVCRTEMNRILEIYKGFEGVSTLVDVGGGNGANLKMIISKNPSIKGINFDLPQVIEHATPYPGIKHIGGDMFTSVPEGDAIILKAVCHNWEDEKCVEFLINCHKALPQNGKVIIVEFIMPESPEPTDASKFVSILDNLMFITVGGKERTEKEWENLCKRSGFSKFQVACRAFSALGVMEFYK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01362 367 Pfam O-methyltransferase domain 143 348 IPR001077 GO:0008171
Bva10g01362 367 Gene3D Vaccinia Virus protein VP39 120 367 IPR029063 -
Bva10g01362 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 9 367 - -
Bva10g01362 367 PANTHER O-METHYLTRANSFERASE 9 367 IPR016461 GO:0008168
Bva10g01362 367 SUPERFAMILY "Winged helix" DNA-binding domain 20 121 IPR036390 -
Bva10g01362 367 Pfam Dimerisation domain 39 88 IPR012967 GO:0046983
Bva10g01362 367 Gene3D - 6 118 IPR036388 -
Bva10g01362 367 CDD AdoMet_MTases 207 304 - -
Bva10g01362 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 363 IPR029063 -
Bva10g01362 367 PIRSF O-mtase 8 367 IPR016461 GO:0008168
Bva10g01362 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 367 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01362 Bva-Chr10 9496552 9499269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01362 17 367 Monolignol Biosynthesis Gene Families AT5G54160 47.727 4.92e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01362 - - gmx:100787536 516.538