Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01353 ATGGATTCCAATCATTCCACAGATAATGGAGTGGGGAAAACCTATCCTCAAATTTCCGACGACGATGGTTGCCTCTTAGCCATGCTACTATGCAACGGTCATGTTATTCCTGCAGTGCTTAATGCTGCAGCTCAGCTCAACTTGTTTGAGATCATAGCTAAGGCAACCCCACCATGCTTGTCCGTCGGCGAAATAGCTTCTCAGCTTCCAAACCAATACCCAGACTTGGCTTCTAGACTTGAACGTATGCTGCGTCTGCTTGCCAGTTTCAGTGTTCTTACTTGTTCTACGCGCACCAATGAAAATGGTAGCACTGAAAGAGTTTATGGAATCTCACCAATTAGTAAATACTTGATGCCTGACTCCCTTTCTTCAACCTTGCCACTTCTCTGCCATAGAACATACATTGAATCTTACCAAAACTACAAGCTAGCAATTGTTGACGCTGACAATGACggaattaattttgatcGGCCCCAAGTTACAGAACTTGCAACACCATATCGAGGGATCGAGCACGTTGGAGGAGATATGTTTGTAAGTGTTCCAAAAGGGGATGCTATAATGTTAAAGGCTGTATTGCATAATTGGGAAGACGACACGtgtgttgaaattttaagaaattgctATAAAGCTTTGCCAGAAAATGGGAAGGTGATTGttgtggaaaaattaattccaGAAACTCCAGAAGCTACTGGTGCGTCGAAGTTGGCTTCTGTTATTGACAATCTAATGCTTATTATTGTCAATGGAAAAGAGAGGACCGTGAAAGACTTTGAGCATTTGTGCAAGAGGTCTGGATTTTCCAAATTTCAAGTTGGCTGCTTTGCTATATCTGGAGTTGCGGGAGCACTAGAATtctataaata 872 0.4014 MDSNHSTDNGVGKTYPQISDDDGCLLAMLLCNGHVIPAVLNAAAQLNLFEIIAKATPPCLSVGEIASQLPNQYPDLASRLERMLRLLASFSVLTCSTRTNENGSTERVYGISPISKYLMPDSLSSTLPLLCHRTYIESYQNYKLAIVDADNDGINFDRPQVTELATPYRGIEHVGGDMFVSVPKGDAIMLKAVLHNWEDDTCVEILRNCYKALPENGKVIVVEKLIPETPEATGASKLASVIDNLMLIIVNGKERTVKDFEHLCKRSGFSKFQVGCFAISGVAGALEFYK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01353 290 Pfam Dimerisation domain 39 88 IPR012967 GO:0046983
Bva10g01353 290 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 152 - -
Bva10g01353 290 PANTHER O-METHYLTRANSFERASE 3 152 IPR016461 GO:0008168
Bva10g01353 290 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 274 IPR029063 -
Bva10g01353 290 SUPERFAMILY "Winged helix" DNA-binding domain 20 121 IPR036390 -
Bva10g01353 290 Pfam O-methyltransferase domain 153 270 IPR001077 GO:0008171
Bva10g01353 290 PANTHER O-METHYLTRANSFERASE 153 290 IPR016461 GO:0008168
Bva10g01353 290 Gene3D Vaccinia Virus protein VP39 143 290 IPR029063 -
Bva10g01353 290 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 153 290 IPR016461 GO:0008168
Bva10g01353 290 Gene3D - 6 118 IPR036388 -
Bva10g01353 290 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 153 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01353 Bva-Chr10 9451852 9453850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01353 25 290 Monolignol Biosynthesis Gene Families AT1G77520 33.994 6.12e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01353 K13066 - pvu:PHAVU_008G040200g 232.646