Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01352 ATGGATTCAAAATATTCCACAGAGAATGTGGTGGGGAAAGCCTATCCTCACATTTCCGACGAGGATGGTTGCCTCTTAGCGATGCTACTTGCTAACGGTCATGTTGTTCCTGCAGTGCTTAATGCTGCTATTGAGCTTAACTTGTTCGGGATCATAGCTAATGCAACCCCGCCATGCTTGTCCGTCACCGAAATAGTTTCTCAGCTTCCAAACCAATACCCAGACTTGGCTTCTAGACTTGAACAATACAGATTGAGGACATCCCTCATTGTAATAGGAAGCTTGGTTGGTGGACTTATATTTTGCCACATATgGCAAGGCAGCTCTGGAATGAAGACAACGCTATGGAACAAACTGACTAGCGATTGCTTGATCGCTGCCCTATTGAAGAAGCACTA 398 0.4497 MDSKYSTENVVGKAYPHISDEDGCLLAMLLANGHVVPAVLNAAIELNLFGIIANATPPCLSVTEIVSQLPNQYPDLASRLEQYRLRTSLIVIGSLVGGLIFCHIWQGSSGMKTTLWNKLTSDCLIAALLKKH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01352 132 Pfam Dimerisation domain 39 80 IPR012967 GO:0046983
Bva10g01352 132 PANTHER O-METHYLTRANSFERASE 8 85 IPR016461 GO:0008168
Bva10g01352 132 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 85 - -
Bva10g01352 132 Gene3D - 9 87 IPR036388 -
Bva10g01352 132 SUPERFAMILY "Winged helix" DNA-binding domain 19 76 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01352 Bva-Chr10 9444088 9446440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01352 17 92 Monolignol Biosynthesis Gene Families AT5G54160 38.961 8.63e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01352 - K13066 gmx:100787536 75.0997