Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01350 ATGGATTCCAATCATTCCACAGATAATGGAGTGGGGAAAACCTATCCTCAAATTTCCGACGACGATGGTTGCCTCTTAGCCATGCTACTATGCAACGGTCATGTTGTTCCTGCAGTGCTTAATGCTGCTATTGAGCTCAACTTGTTCGGGATCATAGCTAAGGCAACCCCGCCATGCTTGTCCGTCACCGAAATAGCTTCTCAGCTTCCAAAACAATACCCAGACTTGGCTTCTAGACTTGAGCGCATGCTGCGTCTGCTTGCCAGTTTCAGTGTTCTTACTTGTTCTACGCGCACCAATGACAATGGTAGCACTGAAAGAGTTTATGGAATCTCACCAATTAGTAAATACTTGGTGCCCGACTCCATTTCTTCAACCTTGCCATTTCTCTGTCATAGATCGTACATGGAAGCTTA 416 0.4567 MDSNHSTDNGVGKTYPQISDDDGCLLAMLLCNGHVVPAVLNAAIELNLFGIIAKATPPCLSVTEIASQLPKQYPDLASRLERMLRLLASFSVLTCSTRTNDNGSTERVYGISPISKYLVPDSISSTLPFLCHRSYMEA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01350 138 Pfam Dimerisation domain 39 88 IPR012967 GO:0046983
Bva10g01350 138 Gene3D - 8 118 IPR036388 -
Bva10g01350 138 PANTHER O-METHYLTRANSFERASE 3 127 IPR016461 GO:0008168
Bva10g01350 138 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 3 127 - -
Bva10g01350 138 SUPERFAMILY "Winged helix" DNA-binding domain 20 121 IPR036390 -
Bva10g01350 138 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 138 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01350 Bva-Chr10 9436117 9436533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01350 17 131 Monolignol Biosynthesis Gene Families AT5G54160 44.348 2.71e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01350 K13066 - gmx:100787536 137.887