Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01349 ATGGATTCCAAACATTCCACAGTGAATGGAGTGGGCAAAGCCTATCCTCAAATTTCCGACGACGATGGTTGCCTCTTAGCCATGCTACTCGCTAACGGTCAAGTTGTTCCGGCAGTGCTTAATGCTGCCATTGAGCTCAACTTGTTTGGGATCATAGCTAAGGCAACCCCACCATGCTTGTCCGTCACTGATATAGCTTCTCAGCTTCCAAACCAATACCCAGACTTGGCTCCTAGGCTTGAACGTATGCTGCGTCTGCTTGCCAGTTTCAGTGTTCTTACCTGTTCTACGCGCACCATTGAAAATGGTAGCACTGAAAGAGTTTATGGAATCTCACCAATTAGTAAATACTTGGTGCCCGACTCCATTTCTTCAACCATGTCACTTCTCTATCATAGATCATTCATGGAAGTTTACCAGAATTACAAGCTAGCAATTGTTGATGCTGACAATGACCTATTTAAGAAAGTTAATGGGGCCACCTTATACAAGTATTTGCCGAAAGATCCAACATTTAATCACATTTTTAACAAAGGACAAGCAGATCTCTGTATAGTAATGATGAATAAGGTACTTGAAATATACAAAGGATTTGAAGGAGTTTCAACGTTGGTCGATGTAGGAGGTGGAAATGGGGTGAATCTGAAGATGATTATCTCAATGCATCCTTCAATAAagggaattaattttgatcAGCCCCAAGTTATAGAACATGCAACACCATATACAGGGATAAAACACATTGGAGGAGATATGTTTGCAAGTGTTCCAAAAGGTGATGCTATAATGTTAAAGGCTGTATTGCATAATTGGGAAGACGAAGCGtgtgttgaaattttaagaaattgctATAAAGCTTTGCCAGAAAATGGGAAGGTGATTGTTGTGGAAAAAGTAATTCCAGAAACTCCAGAAGCTACTGATGCATCGAAGTTGGCCTCTGTTATTGACAATCTAATGCTTATTATTGTCAATGGAAAAGAGAGGACTGTGAAAGAACTTGAGAATTTGTGCAAGAGGTCTGGATTTTCCAAATTTCAAGTTGGCTGCTTTGCTATATCTGGAGTTGTGGGAGTACTAGAATtctataaata 1094 0.3885 MDSKHSTVNGVGKAYPQISDDDGCLLAMLLANGQVVPAVLNAAIELNLFGIIAKATPPCLSVTDIASQLPNQYPDLAPRLERMLRLLASFSVLTCSTRTIENGSTERVYGISPISKYLVPDSISSTMSLLYHRSFMEVYQNYKLAIVDADNDLFKKVNGATLYKYLPKDPTFNHIFNKGQADLCIVMMNKVLEIYKGFEGVSTLVDVGGGNGVNLKMIISMHPSIKGINFDQPQVIEHATPYTGIKHIGGDMFASVPKGDAIMLKAVLHNWEDEACVEILRNCYKALPENGKVIVVEKVIPETPEATDASKLASVIDNLMLIIVNGKERTVKELENLCKRSGFSKFQVGCFAISGVVGVLEFYK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01349 364 CDD AdoMet_MTases 203 296 - -
Bva10g01349 364 PANTHER O-METHYLTRANSFERASE 16 364 IPR016461 GO:0008168
Bva10g01349 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 349 IPR029063 -
Bva10g01349 364 Gene3D - 12 118 IPR036388 -
Bva10g01349 364 Pfam Dimerisation domain 39 88 IPR012967 GO:0046983
Bva10g01349 364 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 16 364 - -
Bva10g01349 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 364 IPR016461 GO:0008168
Bva10g01349 364 PIRSF O-mtase 9 364 IPR016461 GO:0008168
Bva10g01349 364 Pfam O-methyltransferase domain 142 344 IPR001077 GO:0008171
Bva10g01349 364 SUPERFAMILY "Winged helix" DNA-binding domain 20 121 IPR036390 -
Bva10g01349 364 Gene3D Vaccinia Virus protein VP39 120 364 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01349 Bva-Chr10 9427260 9428936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01349 17 364 Monolignol Biosynthesis Gene Families AT5G54160 46.742 2.84e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01349 - - gmx:100787536 425.246