Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01346 ATGGTGGTTTTTCTAGAGAAATTGGTATCATGTCTACTGAGGGGTTCAAGTTTGAAGAGAGTGataatctttcttttgttgattgTGCTGAAAAATGCTGGAACAATTTTACCTGTTTGTCCTATGCTTCGACAAATTACACTTACGGTACTGGTTGTGAGATATGGACAGAattatcaagttttaaaaaaaacctaTGAAAATGCTGCTGCAAGGGAGATCAATATCTATAGAACTTTTGAAACTAGAgGAAAAAGCAAGTGGTGGATATCCCTCGTCATAATAGGAGTTCTTATTGCTGTACCTATATTCTGCTATGTATGCTATGTCACCTGGAAAAGATGCAAGGCAGAAGTTGAGAGGATAATGAAGAGAACTATGCTCATAAGCTTTAGAAGCATTGTAGCTTGCACAAAGAACTTCTCAGTAGCAAATAAGCTTGGAGAGGGTGGCTTTGGATCAGTTTATAAGGGGACACTACGAGATGGACAAGAAATAGCAATAAAGAGGCTTTCTAAGAGATCAGGACAAGGGCTGgtagaatttaaaaatgaagctATACTTATAGCCAAACTGCAGCATACAAGTCTTGTCAGGCTTTTAGGTTTTTGtgttgaaagagaagaaagaatattagTATACGAGTACATGTCCAACAAAAGTTTAGACTCCTACCTCTTTGatattgagaaaaagaaaattcttaattGGAATCACCCACTCAACCTTATAGGACTTgCGTGGCAGCTTTGGAGAGATAATAAAGCCATGGAGATAATAGACCCATCGTTGCTCGAATGTTGCCCTTCTCACGAAGCACTAAGATGTGTTCAGGTGGGCTTGCTATGCGTGCAAGACCGTGCAGCAGATAGACCAAGCATGTTAGAAGTTGTTTCAATGCTCTCAAATGAAACAGCCTCGTTGCCTACTCCTAAACAGCCTGCGTTCTATATCGATGTAGAAGAAAGTGAGCCAAACGGATCAGAGGAGCAGCCAAAAACTTATTCCATAAATGAGGTGACTATTTCGGGAATGGATGCCAGATA 1046 0.3681 MVVFLEKLVSCLLRGSSLKRVIIFLLLIVLKNAGTILPVCPMLRQITLTVLVVRYGQNYQVLKKTYENAAAREINIYRTFETRGKSKWWISLVIIGVLIAVPIFCYVCYVTWKRCKAEVERIMKRTMLISFRSIVACTKNFSVANKLGEGGFGSVYKGTLRDGQEIAIKRLSKRSGQGLVEFKNEAILIAKLQHTSLVRLLGFCVEREERILVYEYMSNKSLDSYLFDIEKKKILNWNHPLNLIGLAWQLWRDNKAMEIIDPSLLECCPSHEALRCVQVGLLCVQDRAADRPSMLEVVSMLSNETASLPTPKQPAFYIDVEESEPNGSEEQPKTYSINEVTISGMDAR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01346 348 Gene3D Transferase(Phosphotransferase) domain 1 214 313 - -
Bva10g01346 348 Pfam Protein tyrosine and serine/threonine kinase 143 233 IPR001245 GO:0004672|GO:0006468
Bva10g01346 348 MobiDBLite consensus disorder prediction 321 348 - -
Bva10g01346 348 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 238 316 - -
Bva10g01346 348 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 75 238 - -
Bva10g01346 348 ProSitePatterns Protein kinases ATP-binding region signature. 147 169 IPR017441 GO:0005524
Bva10g01346 348 ProSiteProfiles Protein kinase domain profile. 141 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01346 348 PANTHER OS01G0783800 PROTEIN 238 316 - -
Bva10g01346 348 PANTHER OS01G0783800 PROTEIN 75 238 - -
Bva10g01346 348 SUPERFAMILY Protein kinase-like (PK-like) 125 241 IPR011009 -
Bva10g01346 348 Pfam Domain of unknown function (DUF3403) 303 348 IPR021820 GO:0004674
Bva10g01346 348 SUPERFAMILY Protein kinase-like (PK-like) 240 330 IPR011009 -
Bva10g01346 348 Gene3D Phosphorylase Kinase; domain 1 107 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01346 Bva-Chr10 9399335 9402249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01346 211 317 Receptor kinase-like Gene Family AT4G23190 32.710 9.43e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva10g01346 PK_Tyr_Ser-Thr 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01346 - - lja:Lj6g3v2130020.1 214.542