Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01345 ATGGACAGAAGCAGTGAGAAACGAAGCCTCTTTTTCATTagcttttcttatttcttattcttcacAAACCCTTTTGGTTCATTTGCAGACTCATCATCTCAAGATTCATTATCACCAGAAGACGAAGTATATTTCACCTATTCTGTGAATAGAAGTTCATTATACCTAGGACCAATCCAACTAGTGCCAAGCTTAACTATTACTCCTTGGGGTGAAATACACAAAGCACTTGATCAAAGTGTGGTCTCATGCTTTAGCATGACGCATGGTGTTTACGACTATTTTAATGTCTTCGATTGGGATGATGGGTGCGTGACTCCAGAGTGCAGAAGGACCAACGGAAATGGTAATTTTGAATCAGAACAGGGTGTACTGTCTACCAAGGGGTTCAAGTTCGAAGACAGTGAGAATCTTACCTTGCAAGATTGTGCCGCAAAATGCTGGTATAATTGCTCCTGTTTGGCCTATGCTTCCACAAACGACACCTATGGTACTGGTTGTGAGATATGGACGGAGGTTTCAAGTTTTAATGAAACAGATGAGAATCTTGTTGCAAGGAATATCTACTTCTATAGAAATAAAAGCTATCAAGAACCTGAAACTCAAGCAAAAATCAAGTGGTGGATATCCCTTGTTGTAATAGGAGTTCTAATTGCTCTACCTATATTCTGCTATGTATGCTATGTAATCTGGAAAAGATGCAAGGCAGAAGTTGAGAGGATAATAAAGAGAACCATGCTCATAAGGGAAATTGGAGGCCGTACTGTTGTTTCATTTCTATATGACATAGCAAATACACGAAGCAAAGCACACAAGACAGACAATGAAATCCAAACATTCAGCTTTAGAAGCATTGTTGCTGCCACAAAGAAGTTCTCAAGAGAAAATAAGCTAGGAGAGGGAGGCTTTGGATCTGTTTATAAGGGGACATTGAAAGATGGACGAGAAATAGCGATAAAGAGGCTTTCTAAAAGATCAGGACAAGGATTGTTAGAGTTTAAAAATGAAGCTATACTTATAGCCAAACTGCAGCATACAAGTCTTGTCAAGCTTTTAGGTTTTTGtgttgaaagagaagaaagaatattagTATACGAGTACATGTCCAACAAAAGTTTAGACTTCTACCTCTTTGattttgagaaaaagaaaattctcaatTGGAGTTGTAGATTCAACATTATTCAAGGAATTGCTCAAGGGCTAGTTTATCTCCATATGTATTCAAGAATATTTGAGCTGAAAGGAATTGAAGAAAACACAAATAGAATCGTTGGAACATAtgGTTATATGTCTCCTGAATATGCCATGAACGGCATTGTATCTATAAAGACTGATGTATTTAGCTTTGGAGTCCTAGTACTTGAAATAGTAAGTGGCAAGAAGAATAATTCTCGCTATCACTCAGATTACCCACTCAACCTTATAGGACTAgCGTGGCAGCTTTGGAGAGATGATAAAGCCATGGAGATAATAGACCCATCATTGCTCGAATGTTGCCCTTCTCACGAAGCACTAAGATGTGTTCAGGTGGGCTTGCTATGCGTGCAAGACCGTGCAGCAGATAGACCAAGCATGTTAGAAGTAGTTTCAATGCTCTCAAATGAAACAGCCTCGTTGCCTACTCCTAAACAGCCTGCGTTCTATATCGATGTAGAAGAAAGTGAGTCAAACGGATCAGAGGAAAAGCCAAAAACTTGTTCCATAAATGAGGTGACTATTTCAGTAATGGACGCCagata 1742 0.3754 MDRSSEKRSLFFISFSYFLFFTNPFGSFADSSSQDSLSPEDEVYFTYSVNRSSLYLGPIQLVPSLTITPWGEIHKALDQSVVSCFSMTHGVYDYFNVFDWDDGCVTPECRRTNGNGNFESEQGVLSTKGFKFEDSENLTLQDCAAKCWYNCSCLAYASTNDTYGTGCEIWTEVSSFNETDENLVARNIYFYRNKSYQEPETQAKIKWWISLVVIGVLIALPIFCYVCYVIWKRCKAEVERIIKRTMLIREIGGRTVVSFLYDIANTRSKAHKTDNEIQTFSFRSIVAATKKFSRENKLGEGGFGSVYKGTLKDGREIAIKRLSKRSGQGLLEFKNEAILIAKLQHTSLVKLLGFCVEREERILVYEYMSNKSLDFYLFDFEKKKILNWSCRFNIIQGIAQGLVYLHMYSRIFELKGIEENTNRIVGTYGYMSPEYAMNGIVSIKTDVFSFGVLVLEIVSGKKNNSRYHSDYPLNLIGLAWQLWRDDKAMEIIDPSLLECCPSHEALRCVQVGLLCVQDRAADRPSMLEVVSMLSNETASLPTPKQPAFYIDVEESESNGSEEKPKTCSINEVTISVMDAR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01345 580 ProSiteProfiles PAN/Apple domain profile. 109 195 IPR003609 -
Bva10g01345 580 SUPERFAMILY Protein kinase-like (PK-like) 275 556 IPR011009 -
Bva10g01345 580 Pfam PAN-like domain 136 172 IPR003609 -
Bva10g01345 580 Pfam Domain of unknown function (DUF3403) 535 580 IPR021820 GO:0004674
Bva10g01345 580 Pfam Protein tyrosine and serine/threonine kinase 428 533 IPR001245 GO:0004672|GO:0006468
Bva10g01345 580 Pfam Protein tyrosine and serine/threonine kinase 295 407 IPR001245 GO:0004672|GO:0006468
Bva10g01345 580 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Bva10g01345 580 SMART ntp_6 112 194 IPR003609 -
Bva10g01345 580 Gene3D Phosphorylase Kinase; domain 1 265 367 - -
Bva10g01345 580 Gene3D Transferase(Phosphotransferase) domain 1 369 541 - -
Bva10g01345 580 ProSiteProfiles Protein kinase domain profile. 292 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01345 580 PANTHER OS01G0783800 PROTEIN 76 410 - -
Bva10g01345 580 PANTHER OS01G0783800 PROTEIN 409 548 - -
Bva10g01345 580 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 76 410 - -
Bva10g01345 580 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 409 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01345 Bva-Chr10 9392330 9397444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01345 272 580 Receptor kinase-like Gene Family AT4G23150 46.552 9.78e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva10g01345 PK_Tyr_Ser-Thr 2.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01345 - - tcc:18595921 533.872