Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01339 ATGGACGACGATTTTGAGTTCCCAGCTGCCAACAACATGGATGAGGATTTTGACATTCCCGAGGACGAACCAGTTACCACAACGCTCAAGGTTGGGGAGGAGAAGGAGATTGGGAAGAATGGGCTGAAGAAGAAGTTGGTTAAGGAAGGTGAAGGATGGGAAAGACCTGAAGTTGGAGATGAGGTTGAAGTTCATTATACTGGGACTTTGCTCGATGGAACCCAATTCGATTCGAGTCGTGATAGAGGAACCCCTTTCAAGTTTAAGCTCGGACAAGGACATGTGATCAAGGGATGGGACGAAGGTATCAAAACGATGAAGAAAGGTGAAAATGCCATTTTTACAATACCACCAGAGTTGGCTTATGGAGAATCTGGCTCCCCACCAACTATTCCCCCTAATACCACTCTCCAGTTTGATGTGGAGTTGCTATCTTGGACAAGTGTGAAGGACATATGCAAGGACGGAGGAATATTCAAGAAGATACTCACTGAAGGGGAGAAATGGGATAATCCTAAGGACCTCGATGAAGTCTTTGTTAAGTATGAAGCTCGGCTTGAAGATGGGACGCACATTTCAAAATCTGATGGAGTAGAGTTCACTGTAGGAGATGGCTATTTCTGTCCTGCACTGGCTAAGGCTgtgaaaacaatgaaaaagggAGAGAAAGTTCTCTTGACCGTGAAGCCACAATATGCATTCAACGAGTCTGGAAGGCCAGCATCTGGGGATGAAGGTGCTGTACCTCCAAATGCTACCCTTCAAATAGATCTTGAGTTGGTCTCCTGGAAGACTGTCTCTGATATCACCAAGGACAAGAAAGTTCTGAAGAAGACCTTAAAAGAGGGTGAGGGATATGAACGACCGAACGATGGCGCTGTGGTTCAAGTGAAACTTATTGGCAAGCTGCAAGATGGGACCGTTTTCATCAAGAAGGGTCATGATGATGAGCAACCATTTGAATTCAAGATTGATGAAGAGCAAGTAATTGATGGACTTGAAAGAGCTGTgaagaatatgaagaaaaatgaaattgcacTGGTCACCATTGGACCTGAATATGCTTTGGGTTCTGCTGCATCACCCCAAGAGTTGGCTACTGTTCCTCCCAATTCAACTGTATATTATGAGGTTGAGCTGGTCACTTTCGTTAAGGAAAAGGAATCTTGGGATTTGAACACACCAGAGAAGATTGAGGCAGCtgggaagaaaaaggaagaagggaATGCTTTGTTCAAGACTCGTAAATATGAAAGAGCATCGAAGAGATATGAAAAGGCCATAAGGTATATTGAGTATGATTCCTCTTTCAATGATGAGGAGAAACAACAGACCAAATTGCTGAAGATCACATGCAATCTCAATAATGCTGCCTGTAAATTGAAACTCAAAGATTACAAGCAGGCAGAAAAATTGTGTACAAAGGTATTAGAACTTGATAGTAGGAATGTAAAAGCTCTATACAGAAGAGCACAAGCTTATATTCACCTTGTGGACTTGGATTTGGCTGAGATGGACATCAAGAAAGCCCTTGAAATGGACCCAGATAATAGGGATGTGAAAATGGAATACAGAATcttgaaggagaaaataagagaatacaACAAGAAGGATGCACAATTCTATGGTAGCATATTTgcaaaaatgaacaaattagAACATAATGCAACAGCAAAACGGGAGTCGGTGCCAATGACTATTGATAGCAAAGCGTG 1715 0.4017 MDDDFEFPAANNMDEDFDIPEDEPVTTTLKVGEEKEIGKNGLKKKLVKEGEGWERPEVGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGQGHVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNTTLQFDVELLSWTSVKDICKDGGIFKKILTEGEKWDNPKDLDEVFVKYEARLEDGTHISKSDGVEFTVGDGYFCPALAKAVKTMKKGEKVLLTVKPQYAFNESGRPASGDEGAVPPNATLQIDLELVSWKTVSDITKDKKVLKKTLKEGEGYERPNDGAVVQVKLIGKLQDGTVFIKKGHDDEQPFEFKIDEEQVIDGLERAVKNMKKNEIALVTIGPEYALGSAASPQELATVPPNSTVYYEVELVTFVKEKESWDLNTPEKIEAAGKKKEEGNALFKTRKYERASKRYEKAIRYIEYDSSFNDEEKQQTKLLKITCNLNNAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIHLVDLDLAEMDIKKALEMDPDNRDVKMEYRILKEKIREYNKKDAQFYGSIFAKMNKLEHNATAKRESVPMTIDSKA 571
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01339 571 SUPERFAMILY FKBP-like 24 158 - -
Bva10g01339 571 Gene3D - 34 150 IPR046357 GO:0003755
Bva10g01339 571 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 275 383 - -
Bva10g01339 571 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 271 - -
Bva10g01339 571 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 383 555 - -
Bva10g01339 571 Pfam Tetratricopeptide repeat 461 517 - -
Bva10g01339 571 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Bva10g01339 571 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 144 IPR001179 GO:0003755
Bva10g01339 571 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 381 IPR001179 GO:0003755
Bva10g01339 571 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 172 261 IPR001179 GO:0003755
Bva10g01339 571 Coils Coil 323 343 - -
Bva10g01339 571 PANTHER PEPTIDYLPROLYL ISOMERASE 1 271 - -
Bva10g01339 571 PANTHER PEPTIDYLPROLYL ISOMERASE 275 383 - -
Bva10g01339 571 PANTHER PEPTIDYLPROLYL ISOMERASE 383 555 - -
Bva10g01339 571 Coils Coil 517 537 - -
Bva10g01339 571 Gene3D - 151 264 IPR046357 GO:0003755
Bva10g01339 571 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755
Bva10g01339 571 SMART tpr_5 401 434 IPR019734 GO:0005515
Bva10g01339 571 SMART tpr_5 450 483 IPR019734 GO:0005515
Bva10g01339 571 SMART tpr_5 484 517 IPR019734 GO:0005515
Bva10g01339 571 SUPERFAMILY FKBP-like 151 267 - -
Bva10g01339 571 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755
Bva10g01339 571 Gene3D Tetratricopeptide repeat domain 387 544 IPR011990 GO:0005515
Bva10g01339 571 SUPERFAMILY FKBP-like 266 401 - -
Bva10g01339 571 MobiDBLite consensus disorder prediction 1 21 - -
Bva10g01339 571 SUPERFAMILY TPR-like 396 549 IPR011990 GO:0005515
Bva10g01339 571 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Bva10g01339 571 Gene3D - 265 386 IPR046357 GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva10g01339 Bva-Chr10 9360636 9365149 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01339 1 571 Calmodulin-binding Proteins AT5G48570 73.103 0.0 858
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01339 K09571 - gmx:100819747 962.985