Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01332 atggCATCCAAGGATCTGCCGGAAGATATCATGGTGGAAATCTTAGCAAGACTCCCTGTAAAGTCTCTAACGCGATTCAAGCGATTAAGTAAATCCGCCTCTGCTCTTATAACAAGCTCTTATTTCATCAAtaaacacttcaaattttcttctgaAGTTGCTAGAAACCAGCATGCCCTTCTGATCACACGTTATCTCAAGGAGTATCCACGGAACCCTTGGATGATATTTATTTCTGATGAAACATTAGACGACCCTATTGAATTAGAGTTGCCAATAGAAGACGAAGATGATTTTTATGATACTGCAGTTCACGGTCCTTGCAATGGAATCTTCTGCATTTATCGAAGCTACTCTTTTGCCAAGCAAGGACAGTTAATTTTATGGAACCCAGCAACAAGAGAAGCTAAGGCTCTTCCTTCTCCTCACAATCAACCCATTAAATcagatattttattcatacatGGATTTGGTTTTGATCCCAAAACCAACGATTACAAGGTTGTCAGCATTTCAGCCACAATGCAAGATGCCGTGACTCTTTTCAATGATGAACCTTCTTCTTCGGTCACGGTATATAATCTAAGTTCAAATTCATGGAGGACCATAGCAGGAGTTAATGTCTCTCCTTTTGACTTAGGTACACCAAAgtttaattcatatttaaatggaGTTTATCATTGGAAAAATCTTCAAAGATATGGCAACACGATTATTTGCTTTGACATAAGCAAGgaaatattttggaaaattgagATCCCATGCTTTAAAAGTTGCTATCTGGAGTGGCAAGTTGCTGTCATCGATGACTCTGTGGCCTGTGTCACGGGACCAACCGAAACAGACTTATATGAGATATGGATAATGAATGAGTATGGTGTCAAAGAATCATGGACTAGAAAGTATAAGCTTGTAATTGATTTTTCCCCAGGCTTTTGTGATGATAATCTGTTTCATACAGATCAGGGGCCTCGATGGTTGGCTTCTTATTATCCTCGTATAAAACAGAAAGAGCAAGGGTTTCTAATCTACGTATCAGTATTGTTTCAGGCAGTTAGGTATGCTGAAAGTTTGTTTTCCTTACCTGTCTTGGAGTG 1097 0.3674 MASKDLPEDIMVEILARLPVKSLTRFKRLSKSASALITSSYFINKHFKFSSEVARNQHALLITRYLKEYPRNPWMIFISDETLDDPIELELPIEDEDDFYDTAVHGPCNGIFCIYRSYSFAKQGQLILWNPATREAKALPSPHNQPIKSDILFIHGFGFDPKTNDYKVVSISATMQDAVTLFNDEPSSSVTVYNLSSNSWRTIAGVNVSPFDLGTPKFNSYLNGVYHWKNLQRYGNTIICFDISKEIFWKIEIPCFKSCYLEWQVAVIDDSVACVTGPTETDLYEIWIMNEYGVKESWTRKYKLVIDFSPGFCDDNLFHTDQGPRWLASYYPRIKQKEQGFLIYVSVLFQAVRYAESLFSLPVLE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01332 365 Pfam F-box associated 222 315 IPR006527 -
Bva10g01332 365 PANTHER OS09G0372900 PROTEIN-RELATED 5 304 - -
Bva10g01332 365 SMART fbox_2 6 46 IPR001810 GO:0005515
Bva10g01332 365 SUPERFAMILY Galactose oxidase, central domain 118 271 IPR011043 -
Bva10g01332 365 TIGRFAM F_box_assoc_1: F-box protein interaction domain 107 327 IPR017451 -
Bva10g01332 365 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Bva10g01332 365 Pfam F-box domain 5 40 IPR001810 GO:0005515
Bva10g01332 365 PANTHER AND ASSOCIATED INTERACTION DOMAINS-CONTAINING PROTEIN, PUTATIVE ISOFORM 1-RELATED 5 304 - -
Bva10g01332 365 SUPERFAMILY F-box domain 5 60 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01332 Bva-Chr10 9320523 9321620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01332 192 325 Carbohydrate Esterase AT1G25141 25.532 2.86e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01332 - - qlo:115979538 197.593