Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01321 ATGCCAATGATGCAGGAGGAAAGAACTCTGACAAATAATAAGGAGTACAACACTGTGAAGTCCTTGAGATATGGTCACTTGATGATTATGAAGGATCAGGATTATGATGGTTCTCACATCAAAGGGCTACTAATCAACTTCAAAGAAATCTTGGGAAATAACGCAAATGGTTGGAAGATAAAGTACTACAAGGGTGAAGGTCCAGATCTGAAATCATCTACTGCTAACAAGGATGAGGAAGTGTATGTTATCCTTCATATATTTGATTCTTCTATTAAAGGTGTTATGTGCATGCTTGTTGGTAAGGTGTATATCCTCCTTCTTGAAGCAGACAATGTGGCTACCATCATTGATCCAAAGATTCTAAAACATTTGATGGAAAACAACGTTGAATATTGCATGGAGGACCAACCTATACCTGTTTTGGAGATCGTTCGAGATCAAGATAAACCTGACGATTTCAAACTTATTGATACATCAAACACGTGGGTGAATTTAAGAGCCATCAAGTGGCTTGTTAACACTGGTAGACTTACAAACGAGATTCTCTCTGTTTCAAAGGAAAAGACAATAATCAAGCATTTCTACAAGGGGCTGCAGCTGGATCAGCTATACAGGCAGTCTGTGGTGAGAGTACTAACAAACCAAAGGAGCAGATCGTTGACATTGATGCAGCTGATGTTGAATAAGAGTTGTCCTCATCAGGAGAGCTATATCGGTAAGGTGTATATCCTCCTTCTTGACGCTGACAATGTGGCTACCATCATCGATCCAAGTATTCTTCAGATTCTAAAACATTTGATGGAAAACAACGTTGAATATTGCATGGAGGACCAACctattcctttaatttataCTCGGGCCCAATTTTGGAGATCGTTCGAGATCCAGATAAACTTtttttgtttatttatggtTGATGGATTCTATTTGAAGGACGATTTCAAACTTATTGATACATCAAACATGTGGGTGACTTTAAGAGCCATCAAGTGGCTTGTTAACACTGGTAGACTTACAAACgagattctctctttttcaaaGGAAAAAGACAATAATCAAGCATTTCTACAAGGGACCGTGGCTGGATCAGCTATACAGGCAGTCTGTGGTGAGAGTACTAACAAACCAAAGGAGCAGATCGTTGACATTGACGCAGCTGATGCTGGTAATGAGCTTGCTGCCGTGGAATATATTGAGGACATCTGCAAGTTCTATACCCTGAGTAAGAGTTGTCCTCATCAGAAGAGCTATATCGGCTGGTGGCTACACTGCCCACAACAAAGTAAGAGTTGTCCTCATCAGAAGAGCTATATCGGCTGGAATGATGCGATATGCTTGCTGCACCAGATTGAGACTCTCAACTTGAAGTATCGATGTAGAGTTCCAGTGATTCTTCAGAACAGAGTTGACACTCACGATGATACTCTAAAGGTGTTCTCTTG 1445 0.3938 MPMMQEERTLTNNKEYNTVKSLRYGHLMIMKDQDYDGSHIKGLLINFKEILGNNANGWKIKYYKGEGPDLKSSTANKDEEVYVILHIFDSSIKGVMCMLVGKVYILLLEADNVATIIDPKILKHLMENNVEYCMEDQPIPVLEIVRDQDKPDDFKLIDTSNTWVNLRAIKWLVNTGRLTNEILSVSKEKTIIKHFYKGLQLDQLYRQSVVRVLTNQRSRSLTLMQLMLNKSCPHQESYIGKVYILLLDADNVATIIDPSILQILKHLMENNVEYCMEDQPIPLIYTRAQFWRSFEIQINFFCLFMVDGFYLKDDFKLIDTSNMWVTLRAIKWLVNTGRLTNEILSFSKEKDNNQAFLQGTVAGSAIQAVCGESTNKPKEQIVDIDAADAGNELAAVEYIEDICKFYTLSKSCPHQKSYIGWWLHCPQQSKSCPHQKSYIGWNDAICLLHQIETLNLKYRCRVPVILQNRVDTHDDTLKVFS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01321 481 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 240 367 - -
Bva10g01321 481 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 448 480 - -
Bva10g01321 481 Gene3D - 6 89 IPR013759 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Bva10g01321 481 PANTHER - 240 367 IPR016267 GO:0003983|GO:0006011
Bva10g01321 481 PANTHER - 448 480 IPR016267 GO:0003983|GO:0006011
Bva10g01321 481 PANTHER - 99 190 IPR016267 GO:0003983|GO:0006011
Bva10g01321 481 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 98 219 IPR029044 -
Bva10g01321 481 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 223 374 IPR029044 -
Bva10g01321 481 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 99 190 - -
Bva10g01321 481 SUPERFAMILY Type II DNA topoisomerase 12 101 IPR013760 GO:0003918|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01321 Bva-Chr10 9266991 9275208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01321 352 420 Core Cell Cycle Gene Families AT2G26760 40.580 1.90e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01321 K00963 K03164 cit:102627594 93.5893