Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01315 ATGGTCCAACACCAATCCCAACACACAAACAGCTTCTTACCTTTCCTTTTGTCTGCTACCTGCTCCcatctctcttctcttctgtaCAATACGAAACCAGAGACCCACAAAAACCAGACATTAAAACTCTCTCCCTCCTCCTTTCTCTCTTCCCAAATCTCAATGGGTAAGCTCAAAACCctagtttctctctctatattcatcttctttctcttgttttccaCCGCCATTGCCGATGACGGCGCCTTCATGAAGGAGCTCCTGAAAGCCCTGTCCCCAACTCCTTCTGGTTGGTCTTCTGATACCCCATGCTGCGAATGGAAAGGCATCAACTGTGACAACTCCAACCGCGTCACCTCCATCAACCTTGCTTCCAAGCAACTCTCTGGTACCCTTCGTTCGGACCTGAACTCGCTCTCTCAACTCACTAGTCTGTCTCTCCAGAGCAATGCTTTTTCTGGGCCTTTGCCTTCTTTGGCGAACCTTTCTTTACTTCAAGAGGTTTACCTTGACTTCAACAATTTCACATCCATCCCTGCTGGTTGCTTTCAAGGGCTCACCAGCTTGCAAACCCTCAGCTTGAGCGGTAATGGCGATCTAGCACCTTGGACGATCCCCACCGAGTTGACTCAGTCCTCGAGTCTGAGAACTCTTGAACTGGGTTCTGCAAATGTCATTGGTACCATACCTGATTTCTTTGATTCGTTCCCGAGCTTGCAGGAAATTCGTCTTTCTTACAACAATCTCACTGGGGCTTTGCCCAAGTCATTTGGAGGATCTGAGATTTCGAATTTGTGGCTCAACAATCAGGAAAATGGGTTAACGGGTACAATTGAAGTGTTGGGTTCAATGCCCCAGTTGTCTCAGGTGTGGCTTCATACGAACAAGTTCACGGGTGCGATTCCTGATTTGTCAAATTGCACAAATTTGTCTGATCTGCAGCTTCGAGACAATGATTTGACTGGTATAGTTCCTCCTTCTTTGATGGGTATGTCAAGCTTAAAGAATGTTTCTTTGGACAACAATGAACTGCAGGGGCCTATGCCAGAGTTTGGCAAAGGTGTTAAGGTAACTCTTGACGGGATTAATAGCTTTTGTAGAAACACTACAGGACCTTGTGATGACCGGGTGACCACTTTGCTTCATATTGCTGAAGCATTTGGCTATCCAAGTAAGTTGGCAGAGTCATGGCAAGGGAATGATCCTTGTCAACAATGGACTTTCACTGTGTGTACAGAGAGCAAGATTACTACAGTGAATTTTGCGAAGCAGAATCTGCAGGGAACTATCTCACCAGCATTTGCCAATCTAACAGATTTGAGGAACTTGTATCTAAACGGTAACAATTTGACTGGTTCAATACCAAAGATTTTGACAACTTTGGCTTCACTTGAGAATCTTGATGTGTCTAATAACAATCTTTCTGGAGAGATTCCTGAATTCCCATCACATGTTAAGTTAGTATCTACTGGTAATGTTTTGCTTGGAAAAAGTCCCAGTTCTGGAGGTGGAGGAAATGGAAGTAATTCATCTAGTAGTTCTGATGTTACGCCAAGTGGAGATGCATCTGGATCGGGAAATGGTTCTTCACTATCAGCTGGTTGGATTGCTGGTATTGTTATTATTGCTGCATTTTTCGTGGTTGTGGTATTGTTTGTCATTTGGAAGTGTTATACTAAAAATCGTCATCAGAAATTTGGAAGGGTTAGTAATCCTAAAAATGGGAAGGGTGATGTTAAACTTGATATAATGAGTAGTTCCCATTCCAATGGATATGCTGGAATTCCAAGTGAGTTACAAAGCCAAAGCAGTACCGGTGATCATAGTGAACTTAATGTTTTTGAGGGTGGAAATGCTACAATTTCAATTCAAGTACTTAGACAAgtgacaaataatttcagtGAAGATAACATTTTGGGAAGGGGAGGATTTGGAGTTGTTTATAAGGGGGAATTACATGATGGGACTAAAATTGCTGTCAAGAGGATGGAATCTGTTGCAATGGGAAGCAAAGGACTGAATGAGTTCCAAGCAGAAATCGCGGTCCTTAGTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATATTGCATTAATGGCAACGAGAGACTTTTGGTTTATGAGTATATGCCTCAAGGGACATTAACAGAACATCTATTTGATTGGCGTGAGAATGGATGCGCACCTTTGACTTGGAAGCAAAGGGTTGCAATAGCTTTGGATGTAGCTCGGGGAGTAGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCATAGAGACTTAAAACCTTCAAACATACTTCTAGGTGATGACATGAGAGCAAAGGTTGCagattttggtttggttaaaaATGCACCTGATGGGAAGTATTCTGTTGAGACACGGTTGGCTGGAACATTTGGGTATCTTGCTCCTGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCCTTTGGAGTAGTTTTGATGGAACTCATCACTGGTAGAAGagcattggatgattctatgccAGATGAAAGGTCTCATTTAGTTTCATGGTTCCGTCGAGTACTAATCAACAAGGAAAACATCCCAAAGGCAATTGATCAAGCTCTCGATCCTGATGAGGAAACCATGGAGAGCATATATAAAGTGGCTGAACTAGCAGGGCATTGTACTGCTCGTGAGCCATACCAAAGGCCTGACATGGGCCATGCCGTCAATGTCTTGGTTCCTCTTGTGGAACAATGGAAACCTACCAaccatgaagaagaagaaagctacGGCATTAATCTAGACATGAGCCTTCCTCAAGCTTTGAGAAGATGGCAAGCCAATGAAGGCACTTCTACTATGTTTAACGACATGTCGTTCTCCCAAACCCAATCAAGCATCCCTTCAAAACCTGCCGGATTTGCAGACTCTTTTGATTCAGTGGATTGCAGGTA 2945 0.4146 MVQHQSQHTNSFLPFLLSATCSHLSSLLYNTKPETHKNQTLKLSPSSFLSSQISMGKLKTLVSLSIFIFFLLFSTAIADDGAFMKELLKALSPTPSGWSSDTPCCEWKGINCDNSNRVTSINLASKQLSGTLRSDLNSLSQLTSLSLQSNAFSGPLPSLANLSLLQEVYLDFNNFTSIPAGCFQGLTSLQTLSLSGNGDLAPWTIPTELTQSSSLRTLELGSANVIGTIPDFFDSFPSLQEIRLSYNNLTGALPKSFGGSEISNLWLNNQENGLTGTIEVLGSMPQLSQVWLHTNKFTGAIPDLSNCTNLSDLQLRDNDLTGIVPPSLMGMSSLKNVSLDNNELQGPMPEFGKGVKVTLDGINSFCRNTTGPCDDRVTTLLHIAEAFGYPSKLAESWQGNDPCQQWTFTVCTESKITTVNFAKQNLQGTISPAFANLTDLRNLYLNGNNLTGSIPKILTTLASLENLDVSNNNLSGEIPEFPSHVKLVSTGNVLLGKSPSSGGGGNGSNSSSSSDVTPSGDASGSGNGSSLSAGWIAGIVIIAAFFVVVVLFVIWKCYTKNRHQKFGRVSNPKNGKGDVKLDIMSSSHSNGYAGIPSELQSQSSTGDHSELNVFEGGNATISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGSKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTEHLFDWRENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDSMPDERSHLVSWFRRVLINKENIPKAIDQALDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEESYGINLDMSLPQALRRWQANEGTSTMFNDMSFSQTQSSIPSKPAGFADSFDSVDCR 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01315 981 Gene3D Phosphorylase Kinase; domain 1 594 710 - -
Bva10g01315 981 SUPERFAMILY L domain-like 88 487 - -
Bva10g01315 981 PANTHER OSJNBA0070M12.3 PROTEIN 64 981 - -
Bva10g01315 981 SMART serkin_6 633 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01315 981 ProSiteProfiles Leucine-rich repeat profile. 463 485 IPR001611 GO:0005515
Bva10g01315 981 Pfam Leucine rich repeat N-terminal domain 80 113 IPR013210 -
Bva10g01315 981 Pfam Leucine rich repeat N-terminal domain 376 408 IPR013210 -
Bva10g01315 981 Gene3D Ribonuclease Inhibitor 82 371 IPR032675 -
Bva10g01315 981 ProSiteProfiles Protein kinase domain profile. 633 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01315 981 Pfam Leucine rich repeat 165 197 IPR001611 GO:0005515
Bva10g01315 981 MobiDBLite consensus disorder prediction 498 524 - -
Bva10g01315 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 758 770 IPR008271 GO:0004672|GO:0006468
Bva10g01315 981 Pfam Protein tyrosine and serine/threonine kinase 636 907 IPR001245 GO:0004672|GO:0006468
Bva10g01315 981 SUPERFAMILY Protein kinase-like (PK-like) 609 909 IPR011009 -
Bva10g01315 981 Gene3D Transferase(Phosphotransferase) domain 1 711 935 - -
Bva10g01315 981 ProSitePatterns Protein kinases ATP-binding region signature. 639 661 IPR017441 GO:0005524
Bva10g01315 981 Gene3D Ribonuclease Inhibitor 374 498 IPR032675 -
Bva10g01315 981 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 64 981 - -
Bva10g01315 981 CDD STKc_IRAK 639 912 - -
Bva10g01315 981 SMART LRR_typ_2 236 259 IPR003591 -
Bva10g01315 981 SMART LRR_typ_2 186 212 IPR003591 -
Bva10g01315 981 SMART LRR_typ_2 437 460 IPR003591 -
Bva10g01315 981 SMART LRR_typ_2 461 484 IPR003591 -
Bva10g01315 981 SMART LRR_typ_2 162 185 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01315 Bva-Chr10 9240487 9244577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01315 118 909 Receptor kinase-like Gene Family AT5G07280 33.088 6.96e-98 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva10g01315 PK_Tyr_Ser-Thr 9.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01315 - - gmx:100781851 1363.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01315 10 9240487 9244577 Bva10g01315 10 9240487 9244577 ECH