Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01301 ATGGCAAGAGTTAGAGATAGAACAGAAGATTTTAAAGATGCTGTTCGGCACAGTGCTCACTCTTTGGGATATGATGAGGTCAAATTGGCATCTATTATGGCGTCTTTCATTATTCATAAACCTCGACAAAGGTCGCCTTTTACCAAAGCTGCCATGAAGACGCTTGAGAGCATTGGAGAATTAGAACAGTTTCTGTTGAAGCATAGAAAGGACTATACAGATATGCACCGCACAACTGAACAGGAGAGAGACAGCATTGAACATGAAGTCAGtgcttttattaaaacttgCCAAGAACAAATTGATGTTCTCAAAAACAGCATTAATGATGAAGAGGGAAACACAAAAGGCTGGCTTGGTATTGGAGCTGGTAATTCTAATGCTGACACTATTGCCCACAAACATGGGGTGGTTCTAATTCTAAGTGAGAGACTACATTCAGTTACTGCACAGTTTGATCAGCTCAGAGCTATACGCTTCCAGGATGCTATTAATAGAGCAATACCACGAAGAAAACTTAACCGTGTGACTCGAACAGGTTCTGCAGAAACCTCTAAAATGGGGGATGTGGAGCCCAAAGAACCTAATCAGTTACGCGATGAGCCTCTAAGAGTCCAACAACAACTCTTGGATGATGAAACGCGTGCCCTTCAGGTGGAATTGACTAATCTTCTAGATGCTGTTCAAGAAACTGAGACTAAGATGGTGGAAATGTCTGCACTAAATCACCTTATGTCCACGCATGTTTTGCAACAGGCTCAGCAAATTGAGCTTCTGTATGAGCAGGCTGTTGAAGCGACTAAGAATGTTGAGCTTGGCAACAAAGAACTCTCCCAGGCCATTCAGCGGAACAGTAGTAGTAggacatttcttttattgtttctatTTGTACTTACTTTTTCAGTCATCTTTCTTGATTGGTACAGCTA 929 0.4047 MARVRDRTEDFKDAVRHSAHSLGYDEVKLASIMASFIIHKPRQRSPFTKAAMKTLESIGELEQFLLKHRKDYTDMHRTTEQERDSIEHEVSAFIKTCQEQIDVLKNSINDEEGNTKGWLGIGAGNSNADTIAHKHGVVLILSERLHSVTAQFDQLRAIRFQDAINRAIPRRKLNRVTRTGSAETSKMGDVEPKEPNQLRDEPLRVQQQLLDDETRALQVELTNLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSVIFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01301 309 SUPERFAMILY t-snare proteins 55 273 IPR010989 GO:0016020|GO:0016192
Bva10g01301 309 Gene3D - 212 306 - -
Bva10g01301 309 MobiDBLite consensus disorder prediction 176 196 - -
Bva10g01301 309 Coils Coil 94 114 - -
Bva10g01301 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Bva10g01301 309 PANTHER SYNTAXIN-18 5 309 - -
Bva10g01301 309 PANTHER SYNTAXIN-18 5 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01301 Bva-Chr10 9141068 9145563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01301 65 309 SNARE and Associated Proteins AT1G51740 74.797 3.31e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01301 K08492 - gmx:100778011 515.383