Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01298 ATGGAGGAAATAATTGTAGGGGTGGCAACCAACATTTtagagaaacttgagaccaaagCTTATGAAGAGGCTGCCAGGGTTTGGTGTTTGAAGGATGAAGTGGAAAGGCTTCAAAACTCGATGCAATTCATCAACGCTTTTCTAGTCGATGCTGAGAACAAGAAAGCAGAGAATCGCAGCATAGCTGTGTGGCTACGACAACTCAAAGCTGCATTCCTTGATGCTGAGGATATATTGGATGAAATAGAGTGTGAAGCATTGCGGAATCATGTGGTCAAGATGCATGGCAGTGCTACTAGAAAGGTACGGCGCTTCTTTTCAAGCTCTAATCCACTTGTATTCCGCATTAAAATGGCTCACAAAATCAAGCATGTCAAACAAAGGATAGATGAGATAGCTTCTGATCGGGAAGGGCATGGTCTCATTAGACTTCAACTTAATAATTTGCCTTTCATCACTCAGGGGATGCCATTGAGGGAGACCCATTCTCACCTCGATGCATCTCTACTGATTGGTAGGGATGATGAGAAAGAAGAGCTcataagaattttgaagagCCCAGTGACACATGATGATCAAATCCCCGTTATTTCAATTGTTGGAATTGGAGGATTAGGAAAGACCACACTTGCCAAATTGGCATACAATGATGAGAGAATAATTGAGCATTTTGAATCACGAATTTGGGTTTATGTGTCAGATGAATTTGatgttaaaaagttaatatctAAAATTCTTAGAGAGATGAGTAGACAAAATTTAGGAGCTCTTAGCTTTAACCAATTGCAATCTCTTCTTCgagaaaaatttccaaaaaagaaatgtctACTTGTtttggatgatgtttggaatgAAGATCGGAAAAAATGGATTGAGTTAAAAGATGCTTTATTAGGTGATAGAATGGGTCAAAATGATAGCAAAATCATAGTCACCACCCGTAGTGAAGAAGTTTCCTCAGTCATGGGAACTACTCATCAACACAAGTTGAAGGATCTTTCCAAAGATGAAAGTTGGAAGCTATTTGTTAGATGGGCTTTTCAAGGAGAGGAGGAACAACAACCTAGGCTTAAACAAATTGTGAAGAAAATCGTTAAGAAGTGCAAAGGAGTGCCCCTGGCCGTGGTGAGTTTAGGATCCATGCTTTATTCACAGCGGGATGTAAGGTGCGATAATTTAGTCAACTTGCCATATGATTTAGAGCAACTCCCTGCTTTAAGGAATTTGATCATATATGGTTGCCATTTGCTTGTTAAttttcaagaagaagaagaaaaggaaaacattgaAGGGGTTCAAGATTCTAGCCTTGAGCACTTTATAGTTTCCAATTGTCCCAGATTGAAATCTTTACCAAATTGGCTTCAAAGATCTAAGACTTTACAGTACATGCTTGTTGACGATTGTAAGAGCTTGGAGGTACTGCCAGAATGGCTGCCAAATCTAAACTCACTTCACGagcttgaaattttaaattgtccATTGGTTTGGAGGTGCAAACAAGACTCTGGTCCAGACTGGCCCAAAATAGCTCATATCCCCAAGTA 1547 0.3659 MEEIIVGVATNILEKLETKAYEEAARVWCLKDEVERLQNSMQFINAFLVDAENKKAENRSIAVWLRQLKAAFLDAEDILDEIECEALRNHVVKMHGSATRKVRRFFSSSNPLVFRIKMAHKIKHVKQRIDEIASDREGHGLIRLQLNNLPFITQGMPLRETHSHLDASLLIGRDDEKEELIRILKSPVTHDDQIPVISIVGIGGLGKTTLAKLAYNDERIIEHFESRIWVYVSDEFDVKKLISKILREMSRQNLGALSFNQLQSLLREKFPKKKCLLVLDDVWNEDRKKWIELKDALLGDRMGQNDSKIIVTTRSEEVSSVMGTTHQHKLKDLSKDESWKLFVRWAFQGEEEQQPRLKQIVKKIVKKCKGVPLAVVSLGSMLYSQRDVRCDNLVNLPYDLEQLPALRNLIIYGCHLLVNFQEEEEKENIEGVQDSSLEHFIVSNCPRLKSLPNWLQRSKTLQYMLVDDCKSLEVLPEWLPNLNSLHELEILNCPLVWRCKQDSGPDWPKIAHIPK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01298 515 Coils Coil 65 85 - -
Bva10g01298 515 Gene3D Ribonuclease Inhibitor 387 503 IPR032675 -
Bva10g01298 515 Pfam NB-ARC domain 177 385 IPR002182 GO:0043531
Bva10g01298 515 PANTHER OS08G0543100 PROTEIN 29 387 - -
Bva10g01298 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 385 IPR027417 -
Bva10g01298 515 Gene3D - 9 123 - -
Bva10g01298 515 SUPERFAMILY L domain-like 389 514 - -
Bva10g01298 515 PANTHER DISEASE RESISTANCE PROTEIN RP 29 387 IPR044974 GO:0006952
Bva10g01298 515 Gene3D - 160 329 IPR027417 -
Bva10g01298 515 Pfam Rx N-terminal domain 11 100 IPR041118 -
Bva10g01298 515 PRINTS Disease resistance protein signature 368 382 - -
Bva10g01298 515 PRINTS Disease resistance protein signature 269 283 - -
Bva10g01298 515 PRINTS Disease resistance protein signature 480 496 - -
Bva10g01298 515 PRINTS Disease resistance protein signature 196 211 - -
Bva10g01298 515 CDD RX-CC_like 7 134 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01298 Bva-Chr10 9130706 9133121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01298 194 386 WRKY Transcription Factor Family AT5G45050 26.289 9.32e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01298 - - cam:101500245 390.193