Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01296 ATGGAGGAAATAATTGTTGGGGTGGCAACAAAAATTTTGGAGAAGCTTGCGACCAAAGCTTGCCAAGAGGCTGCCCTGGCTTGGGGTCTGAAGGATGAAGTGGAAAGGCTTCAAAACTCAATGCAATTCATCAATGCTTTTCTCGTCGATGCTGAGAACAAGAAAGCAGGGAGTCATAGCATAGGTGTGTGGCTACGACAACTCAAAGCTGCATTCCATGACGCTGAGGATGTATTGGACGAAATGGAGTGTGAGGCATTGCGAAATGAAGTGGTCAAGATGCATGGCAGTGCTACTAGAAAGGTACGGCGCTTCTTTTCAAGCTCTAATCCACTTTTATTCCGCATTAAAATGGCTCACAAAATCAAGCATGTCAAAGAAAGAATAGATGAGATAGCTTCTGATTGGAAAAAGTATGGTCTCATTGAACATCACCCCAATAATTTGACTTGCATCACTCAGGGGATGCCATTGAGGGAGACCCATTCTCACCTCGATGAATCACTAGTGATTGGTAGGGATAATGAGAAAGAAGAGCTGATAAGTTTCATGATGAGCCAACAGACTTATCATGATAAAATCCCCGTTATTTCAATTGTTGGAATTGAAGGATTAGGAAAGACCACACTTGCCAAATTGATGTACAATGATGAGAGAATAATTAAGCATTTTGAATCACGGGTTTGGGTTTGTGTCTCAAATGAATTTGatgttaaaaagttaatatcaAAAATTCTTAAAGAGATGGGTAGACAAAATTTAGGAGCTCTGAGCTTTAATCAATTGCAATCTCTTCTTCgagaagaatttttaaaaaagaaatgtctaCTTATtttggatgatgtttggaatgAAGATAGAAAAAAATGGGTTGAGTTAAgcaataatttattaggtgCTGGAATGGGTCAAAATAATAGCAAAATCATAGTCACCACCCGTAGTGAAAAGGTTTCCTCAGTCATGGGAACTACTCATCAACACAAGTTGAAAGATCTTTCCAAAGATGAAAGTTGGAAGCTATTTGTTAAATGGGCTTTTCAAGAAGGAGAGGAGGAACAACAACCTAGGCTTAAACAAATTGGGAAGGAAATCGTTAAGAAGTGCAAAGGAGTGCCCCTGGCCGTGGTGAGTTTAGCATCCATGCTTTATTCAGAGAGGGATGTAAGGTGTGATAATTTAGTCAACTTGCCATATGATTTAGCGCAACTCCCTGCTTTAAAGAAATTGACAATCGGAGATTGTGATATGCTTGTTAAttttcaagaagaagaaaaggaaaacattgCAGGGGTTCAAGATTTGAGCCTTGAgcattttatagttttcaaTTGTCCCAGTTTGAAATCTTTACCCTGTTGGCTTCAAAGATCCAAGACCTTACAGTATATGCTTGTTGCCTCTTGTGAGAGCTTGGAGGCACTGCCAGAATGGATGCCAAATCTAAAGTCACTTGAGGAGCTTGAAATCACAGGATGTCTCCAATTGAGTGAGAGGTGTAGACAAGACTCTGGTCTAGACTGGCCTAAAGCAGCTCATATCCCCAAGTA 1550 0.3761 MEEIIVGVATKILEKLATKACQEAALAWGLKDEVERLQNSMQFINAFLVDAENKKAGSHSIGVWLRQLKAAFHDAEDVLDEMECEALRNEVVKMHGSATRKVRRFFSSSNPLLFRIKMAHKIKHVKERIDEIASDWKKYGLIEHHPNNLTCITQGMPLRETHSHLDESLVIGRDNEKEELISFMMSQQTYHDKIPVISIVGIEGLGKTTLAKLMYNDERIIKHFESRVWVCVSNEFDVKKLISKILKEMGRQNLGALSFNQLQSLLREEFLKKKCLLILDDVWNEDRKKWVELSNNLLGAGMGQNNSKIIVTTRSEKVSSVMGTTHQHKLKDLSKDESWKLFVKWAFQEGEEEQQPRLKQIGKEIVKKCKGVPLAVVSLASMLYSERDVRCDNLVNLPYDLAQLPALKKLTIGDCDMLVNFQEEEKENIAGVQDLSLEHFIVFNCPSLKSLPCWLQRSKTLQYMLVASCESLEALPEWMPNLKSLEELEITGCLQLSERCRQDSGLDWPKAAHIPK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01296 516 Coils Coil 65 85 - -
Bva10g01296 516 CDD RX-CC_like 22 134 IPR038005 -
Bva10g01296 516 PANTHER OS08G0543100 PROTEIN 26 387 - -
Bva10g01296 516 CDD AAA 171 313 - -
Bva10g01296 516 PRINTS Disease resistance protein signature 269 283 - -
Bva10g01296 516 PRINTS Disease resistance protein signature 369 383 - -
Bva10g01296 516 PRINTS Disease resistance protein signature 480 496 - -
Bva10g01296 516 PRINTS Disease resistance protein signature 196 211 - -
Bva10g01296 516 Pfam Rx N-terminal domain 11 97 IPR041118 -
Bva10g01296 516 SUPERFAMILY L domain-like 388 498 - -
Bva10g01296 516 Pfam NB-ARC domain 176 386 IPR002182 GO:0043531
Bva10g01296 516 Gene3D Ribonuclease Inhibitor 388 503 IPR032675 -
Bva10g01296 516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 385 IPR027417 -
Bva10g01296 516 Gene3D - 9 123 - -
Bva10g01296 516 Gene3D - 158 328 IPR027417 -
Bva10g01296 516 PANTHER DISEASE RESISTANCE PROTEIN RP 26 387 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01296 Bva-Chr10 9119788 9122204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01296 194 376 WRKY Transcription Factor Family AT5G45050 26.531 4.71e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01296 - - cam:101500245 394.815