Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01290 ATGACAATGTTGTCTGTTTGCTCAGCCACCCCAAGTTATTCTCCTTGCCAGAACCCCTTATATGGAGGGTTGCAGCCCTTGTATCCATTTTCGAAGGAGCTTGAGAGTAGATGTGTTGCAGAAGGTGTACGTCTGGGTTTGCGATATGGAAATCACACAATGAGAAATTCCTTTGTAGCACAAGCTACAAAGTCTGGCCACATCAGCATCATTAAAAGCGCTGAACAGTCAGTCTCCTTGGAATTTCCTGACAGTTTTTTCTCTGCAAATGAACCAGGACATCTTAAATGTGAGTTTACAAGTATGTGGAGTTCACCAGAAATAAGGGATGGACAACATTCACTGAGTAGTGGAGAATTCAGATACAAagagatttataatttgtctGCTGTACCAGAGGATTTGATGGACTTTACAGAACAGTCAACCAAAAGATTGGATACATTAGTAGCACCAGGACAGCCAGAAACAATATTAAGTACAGATATAACATCAGAGAATTTCGCCCCTGCACCTAGTTCAATCAACATGGACAATGAATCATTAGCAAGCACAAAAGCAAGTGTTGGTGATATTTTCACTGGAATCAATGAGTCATTGAATGCCTCCATCAATAAGGGAGAAAGTGCTCTGCAAAGCTCACTTGATACAACCACTTCTTTGATAAAATCTGTCATTGAAAATGCTACTAAATCAGTTGATAATGCATTCGGTGAGGTGCTTTCTGCTGCTGATCAAACAGGAGAGTTAGCTAATAAGAAATTGACAAACTTTTCAAGTGAGATAAATGCAGTTGTAAATAAAGCACCTGCTATAGCTATTAACCTGTTGCGAAAAACAATCGTAGTGGTAGAGAATTCTCTGATAAGTGGCACTTCCTATGTTGTCTACCTTTATGGGTTGGCCAAAGACGTTCTTCCTGTGGGGATCAGGGACACAGTAAATGTGTATGAAGAGAAAGCAACAGAAATCTTGAGGCCTATTGGGTCTACATATCAAGAGATCTACATGTCTATCTATTCATTGGAAGAAAGTCTTGGCTTGGATCCAAATGATCCAATTGTtccatttcttgtttttcttggcTCTTCAGCCACATTATGGGTGATTTATTGGTTCTGGACATATGGAGGTTACTCAGGTGATTTACCTCCTCAATCAGCTTTAGAGCTATTGAcaggaaatgaaaatgctGCACTTATAGATATCCGGAATGAGGATCTGAGAGAAAAAGATGGTATTCCTGATCTGAGACGAGCTGCTCGGTTTCGCTATGCTAGTGTAGCTCCACTAGAGgTTGATGTTTCCATAAGGAAGTTATTGAAGCGTAATAGAGATCTTGATGAATCCTTGATGGCTGTTATAATACAGAATTTGAAGATTGTTAAGGACAGTTCCAAGGTTATAATTATGGATGCTGATGGCCGTCGTTCCAAAGGCATTGCAAGAGCCTTGCGGAAAATTGGGATCAAGAATTCGTACTTGGTTCATGGTGGCTTTCAGTCTTGGGTGAAACAAGGACTCCGCATCAAGGAACTTACACCTGAGACAGCACTTTCCATACTCAACGAGGAAACTGAAGCAATTCTGGAGGATATTAACCCTTCTCCTTTGCAAGTTTTAGGTTATGGTACGGTTCTTATTGCGGGGCTGTTTGGATTATTAGAGTGGGAGAAGACATTACAGTTTATTGGTATTTTGGGCATCAGTCTGACAATTTATCGGCGGGTGGCTTCATATGAAAATGCAAATGATTTGAAGCAAGATGTGAGgGCATTGCTTGGTCCTTTTAGACTTGGTGCTCAAGCATTTTCATGGGCTGCTGGGAAATTGGAATCAAACGGCATAGGGCTGCCAACATCACCTTCATCATCAGATGTCCAGAACCGTGTGTTGCAAGCAGCCGCAAAGCATGAATCTCAACCTTCTGACACAGAGGATACTCAAGATCCAGCTCCTGATCCAAATGTTACTCTCAATGAAAACATATG 1991 0.4008 MTMLSVCSATPSYSPCQNPLYGGLQPLYPFSKELESRCVAEGVRLGLRYGNHTMRNSFVAQATKSGHISIIKSAEQSVSLEFPDSFFSANEPGHLKCEFTSMWSSPEIRDGQHSLSSGEFRYKEIYNLSAVPEDLMDFTEQSTKRLDTLVAPGQPETILSTDITSENFAPAPSSINMDNESLASTKASVGDIFTGINESLNASINKGESALQSSLDTTTSLIKSVIENATKSVDNAFGEVLSAADQTGELANKKLTNFSSEINAVVNKAPAIAINLLRKTIVVVENSLISGTSYVVYLYGLAKDVLPVGIRDTVNVYEEKATEILRPIGSTYQEIYMSIYSLEESLGLDPNDPIVPFLVFLGSSATLWVIYWFWTYGGYSGDLPPQSALELLTGNENAALIDIRNEDLREKDGIPDLRRAARFRYASVAPLEVDVSIRKLLKRNRDLDESLMAVIIQNLKIVKDSSKVIIMDADGRRSKGIARALRKIGIKNSYLVHGGFQSWVKQGLRIKELTPETALSILNEETEAILEDINPSPLQVLGYGTVLIAGLFGLLEWEKTLQFIGILGISLTIYRRVASYENANDLKQDVRALLGPFRLGAQAFSWAAGKLESNGIGLPTSPSSSDVQNRVLQAAAKHESQPSDTEDTQDPAPDPNVTLNENI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01290 663 Pfam Rhodanese-like domain 394 505 IPR001763 -
Bva10g01290 663 Gene3D - 380 521 IPR036873 -
Bva10g01290 663 MobiDBLite consensus disorder prediction 617 639 - -
Bva10g01290 663 ProSiteProfiles Rhodanese domain profile. 394 512 IPR001763 -
Bva10g01290 663 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 367 511 IPR036873 -
Bva10g01290 663 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 662 - -
Bva10g01290 663 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 662 IPR044690 GO:0009704|GO:0071277|GO:0090333
Bva10g01290 663 MobiDBLite consensus disorder prediction 646 663 - -
Bva10g01290 663 CDD RHOD 389 504 - -
Bva10g01290 663 MobiDBLite consensus disorder prediction 617 663 - -
Bva10g01290 663 SMART rhod_4 384 509 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01290 Bva-Chr10 9048745 9058337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01290 320 473 Sulfurtransferasese or Rhodanese AT5G23060 29.114 3.42e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01290 - - gmx:100786123 895.96