Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01282 ATGAATAGTTGGGGATCAAATGGAGGCCAAGAGGCACATATGAGAGGTTTTATGCCAAGGGAAATTAACTTCGGCTTGGTCCCTGAACTTCATTTTGCTCTAGGGACCCGCCCAGATAATGAAAATCTGCAGTTGGAAGCTGTAGATGATGGACGATTGGATGATGTTGTTATAATCTCCCCAAGGAAATTTGAAGAAGCCAAGAACAAGGGAGGAAGAAGATATGCTCACAGAAGACATGGGACTACCCATTCAGCCGAGACTTGTTCTTTCCCTGTTAGCAACAACAATGGTGGAACTCCTGACCGACCTATTGTAATTGTGGATTGTGAGCTTAGCTTGAAGGTTGGAGACAGTAGAAAAAAACAGAAAACTGATGATTCTGATGTGCCTCCTCCGGCAGTGCCTCCAAGCTACCACCCGCCTAAGGCACCAAAGTTCAGTTGCGGAATTTGCATGTGTGAGTTGACAGACGCAACATCAACTAAGTGTGGCCATATTTTCTGCAAGGAGTGCCTTGTGGCAGCAATTGCTTTTCAGCATAAATGCCCCTCTTGCAGGCGTAAACTTAGAAAGAATGACATGTTTAGAGTCTATCTTCCTGAGGCTATATTGTG 617 0.4489 MNSWGSNGGQEAHMRGFMPREINFGLVPELHFALGTRPDNENLQLEAVDDGRLDDVVIISPRKFEEAKNKGGRRYAHRRHGTTHSAETCSFPVSNNNGGTPDRPIVIVDCELSLKVGDSRKKQKTDDSDVPPPAVPPSYHPPKAPKFSCGICMCELTDATSTKCGHIFCKECLVAAIAFQHKCPSCRRKLRKNDMFRVYLPEAIL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01282 205 SUPERFAMILY RING/U-box 148 192 - -
Bva10g01282 205 MobiDBLite consensus disorder prediction 118 139 - -
Bva10g01282 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 201 IPR013083 -
Bva10g01282 205 Pfam Ring finger domain 148 187 IPR001841 -
Bva10g01282 205 MobiDBLite consensus disorder prediction 69 97 - -
Bva10g01282 205 ProSiteProfiles Zinc finger RING-type profile. 149 187 IPR001841 -
Bva10g01282 205 ProSitePatterns Zinc finger RING-type signature. 164 173 IPR017907 -
Bva10g01282 205 PANTHER ELFLESS, ISOFORM B 44 202 - -
Bva10g01282 205 SMART ring_2 149 186 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01282 Bva-Chr10 9014963 9019340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01282 90 201 C3H Transcription Factor Family AT3G07200 37.931 4.01e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01282 K22651 - csin:114288711 117.087