Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01277 ATGGGGAATTGCTGGTGTAGAAGGGAACCCTCTGTTTACAGAGTTTCATCCAATGCAAAGTCAGATTCACCCAAAGACCCTTCCAATGCAGTCAAACAACGGAATGATGATAGTAAGTTACCATCCAATCCTGAAGAAGTAGAAGACCTACGCCGTGATTCAGCTACAAATCCATTGATTGTATTCACTTACGATGAACTAAAGATAATCACTGAAAATTTTAGGAAAGATCATGTCTTGGGGGGAGGAGGATTTGGAAGTGTTTATAAAGGGTTTATTTCTGAGGAAGTAAGGAAGGGGCTTCCTTATCTTCCTGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCTCATCCAAATCTAGTCAAGTTGATTGGATACTGCTGTGAAGATGAACATAGGGTGCTAATATATGAGTTTATGGCCCGGGGCAGTGTGGAAAACAATCTCTTCTCCAAAGTGTTGCTTCCTTTGCCATGGTCCGTAAGAATGAAGATTGCATTCGGCGCTGCAAAGGGTCTGGCATTTCTTCATGATGCAGAGAAACCAGTCATCTATCGTGACTTTAAgacatcaaatattttgttggatCTGGACTATAATGCAAAGCTGTCTGACTTCGGCCTTGCTAAAGATGGACCAGTTGGGGACAAATCTCATGTCTCTACTCGCATAATGGGGACATATGGATATGCTGCGCCTGAATACATAATGACAGGTCATCTAACCCCGAGAAGCGATGTTTACAGTTTTGGCGTTGTTCTTCTTGAACTTGTAAGTGGAAGAAAATCTTTAGACAAGTCAAGACCTACAAGAGAACAGAATCTCACAGATTGGGCCCTTCCTTTGctaaaggagaagaagaaactgcTAAACATCATAGATCCAAGGCTAGAAGGAGACTATCCTATAAAGGGAGTTCACAAGGCTTCAATGCTAGCTTATCATTGCTTGAACCGCAATCCCAAAGCAAGGCCCCTAATGAGAGACATAGTAGATTCGTTGGAACCTTTGCAGCTCTACAATGAagtttcttttggaaaaacaTTGACCATAATCAGTGAGGTTCCTGAAGATgagataaagagaaaagatagAAAGCAGTA 1157 0.3959 MGNCWCRREPSVYRVSSNAKSDSPKDPSNAVKQRNDDSKLPSNPEEVEDLRRDSATNPLIVFTYDELKIITENFRKDHVLGGGGFGSVYKGFISEEVRKGLPYLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSVRMKIAFGAAKGLAFLHDAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELVSGRKSLDKSRPTREQNLTDWALPLLKEKKKLLNIIDPRLEGDYPIKGVHKASMLAYHCLNRNPKARPLMRDIVDSLEPLQLYNEVSFGKTLTIISEVPEDEIKRKDRKQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01277 385 MobiDBLite consensus disorder prediction 27 50 - -
Bva10g01277 385 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 9 364 - -
Bva10g01277 385 Gene3D Phosphorylase Kinase; domain 1 36 157 - -
Bva10g01277 385 Gene3D Transferase(Phosphotransferase) domain 1 158 367 - -
Bva10g01277 385 MobiDBLite consensus disorder prediction 14 50 - -
Bva10g01277 385 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Bva10g01277 385 PANTHER OS01G0588500 PROTEIN-RELATED 9 364 - -
Bva10g01277 385 ProSiteProfiles Protein kinase domain profile. 74 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01277 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bva10g01277 385 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Bva10g01277 385 SUPERFAMILY Protein kinase-like (PK-like) 48 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01277 Bva-Chr10 8978509 8983688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01277 20 352 Glycoside Hydrolase AT3G07070 47.564 3.68e-105 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva10g01277 PK_Tyr_Ser-Thr 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01277 - - zju:107415086 665.996