Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01253 ATGGCCATGGCTACCCATTCTATACTCATGCCCGATAATAACGACGCCATTGCCAGCTTCAGATCTTCAATTTCGTCTCAACATTTGCCTCTCACTTCTCCAACCCCGATTTCATGTGCTGATTCTTCCTctttgaagagaaagagacCTCCCATGATCGAGATCCCAAATGTTTTGCAAGAAATCCCAGCAGACAAGCTCAGTGATTTGAAGGCGCCAAATGAATCTGTTTCTTTCAGTGGATTTGGTTTCGGGGTTTCATCGATCAAGGGCAAGAAAAAGTTCATGGAAGATACCCACAAGATCCTTCCTTACTTAGAGGGCAGCGCAAACAAAGGCTTCTTCGGTGTCTACGATGGGCATGGTGGCAAGAACGCGGCAGAGTTTGTTGCTGAAAACTTGCACGCCAACATTCTCAAAATGATGGAGAATTCTGAAGAATTGAAGCCCAAGGAAGAGGTAATTAAGGCTGGGTATCTGAAGACAGATGAAGAATTCTTGAAGCAGGGTTTAGGCAGCGGTGCTTGTTGTGTCACAGCCTTCATTGAAGGGCATGAGATTGTGATTTCGAACCTGGGAGATTGCAGGGCTGTTCTTTGCAGAGGTGGAATGGCTGAAGTTCTTACAAGAGATCATAGAGTAGAACATGAggatgaaaggaaaagaattgaGGATAAGGGAGGATATGTGGAGATTCATCGAGGAGCATGGAGAGTTCATGGGATACTTGCTGTTTCTAGAAGCATTGGAGATGCTCATCTAAAGGAATGGGTGGTTGCTGAGCCAGATACCAAGGTTTTAAAATTGACCGCTGACATGGAGTTTCTTGTCTTGGCTTCTGATGGACTATGGGAACAGGTTGGAAACCAAGAAGCTGTTGATACTATTACGCGGTTATGTCAAAGTGAGAAGAAGGTAGGACCCTCTGGAGATCAGCAGAAAGATGCTGATGATGATCATGGCTGTGTGAATGTTAGTCCATCATCGAAGCTACGGAGAATTTCGTTGATCAAGCAACCAAGAGGGATGAGTGAATCTACCACTGGCTATACGAAGAGATTGAATAGCTGGAATGAAACTGATGAGGACTTTGCTTGTGAAAATGAAAGCCCTCCATCAAAATCACGAAGAATATCAATGGTCAAACgagtaaatatgaaaaaagagaTAGTAACCAAAGGGAGCAACAGCTACAAGAATAGAAGTATGCCTTGTAAATTACTGGCTGCTTGCAAGGAGCTAGTGAACCTTGCTGTGAGTAGGGGGACTTTGGATGACATTACTGTGATGATAGTTGATCTAAACCACTTTAGATGCAGCAAATG 1325 0.4234 MAMATHSILMPDNNDAIASFRSSISSQHLPLTSPTPISCADSSSLKRKRPPMIEIPNVLQEIPADKLSDLKAPNESVSFSGFGFGVSSIKGKKKFMEDTHKILPYLEGSANKGFFGVYDGHGGKNAAEFVAENLHANILKMMENSEELKPKEEVIKAGYLKTDEEFLKQGLGSGACCVTAFIEGHEIVISNLGDCRAVLCRGGMAEVLTRDHRVEHEDERKRIEDKGGYVEIHRGAWRVHGILAVSRSIGDAHLKEWVVAEPDTKVLKLTADMEFLVLASDGLWEQVGNQEAVDTITRLCQSEKKVGPSGDQQKDADDDHGCVNVSPSSKLRRISLIKQPRGMSESTTGYTKRLNSWNETDEDFACENESPPSKSRRISMVKRVNMKKEIVTKGSNSYKNRSMPCKLLAACKELVNLAVSRGTLDDITVMIVDLNHFRCSK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01253 441 SUPERFAMILY PP2C-like 77 436 IPR036457 -
Bva10g01253 441 MobiDBLite consensus disorder prediction 304 323 - -
Bva10g01253 441 CDD PP2Cc 82 298 IPR001932 -
Bva10g01253 441 Gene3D - 78 439 IPR036457 -
Bva10g01253 441 MobiDBLite consensus disorder prediction 27 46 - -
Bva10g01253 441 PANTHER PROTEIN PHOSPHATASE 2C 35 438 IPR015655 GO:0004722|GO:0006470
Bva10g01253 441 Pfam Protein phosphatase 2C 83 303 IPR001932 -
Bva10g01253 441 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Bva10g01253 441 PANTHER PROTEIN PHOSPHATASE 2C 14-RELATED 35 438 - -
Bva10g01253 441 SMART PP2C_4 73 432 IPR001932 -
Bva10g01253 441 MobiDBLite consensus disorder prediction 27 42 - -
Bva10g01253 441 ProSiteProfiles PPM-type phosphatase domain profile. 83 434 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01253 Bva-Chr10 8839545 8842271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01253 16 438 PP2C-type Phosphatase Gene Family AT1G67820 51.628 3.93e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01253 - K17506 qsu:112011602 587.8