Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01245 ATGGGAAGAACCAAACTTTCCACCATTTTCTCTGTAAACAATCACCCTGTTCTTCCTCATTCCAATCCCATCAGTGAAAATCTTGTAGAAAACCCCAGTGCCCAGAAAAATCGATTCTCCCCTTATTCTCTGTTTGGATTGTTGCGTAATCTTTTCTTTGCCAAGAAAGATGATGGTGGCTCGAGGACggaggaagaagagagagtTTACAATTGGTTATACAACTTGGCACAGTCTGAGAAAGATTTGGTCTTCGAGTATGTTCGTTCCACCGAAAGAGGCTTAAGTTTCAAAGAAGCTGAGAGAAGATTGAGGGAAAATGGCCCAAATGTTCCAATTGAGTATTTTTTTCCGAAATGGTGGCATCTCATATGGAATGCCCTTTTCCATCCTTTCAACATCATCCTCATTGTGTTATCTGTTCTTTCCTTCATAGCCAGTGATAACCCAAATGGCAGTATCATGCTCACATTGGTTTTTATCAGTGTCTCCCTTCGTTTTTACCAGGAGTACAGCAGCTCAAAAGCAGCCATGAGACTTTCAGAACATGTAAGATGCCCAATAAAAGTACAAAGATGTGCTGGTAGAGTTGTGCAGACAGAACTAGTGGTTCAAGTTGATCATAGAGATATAGTGCCTGGTGACATTGTCATTTTTGAACCTGGGGATCTCTTTCCTGGAGATATCAGATTATTATCTTCAAAACATCTGGTTGTAAGCCAATCATCACTTACTGGGGAATCTTGGGCAACTGATAAAACTGCTGATATCAGAGAAGATCGTAGCACTCCTTTATTAGAGTTAAAGAACATTTGCTTCATGGGCACAAGTGTGGTGTCAGGTAATGGAACAGGGTTAGTTGTTTCAACTGGATCTAAAACTTACATGAGCACCATGTTTTCAACAATTGGGAAGAAGAAGCCACCAGATGAATTCGAAATGAGTCTCCGTTGGATATTTTACTTGCTTGTGGCAATTATACTTGTAGTAGTGACCATCATAGTTGTAACAGATTACAGTACATCTCTTGATTTGAGCAGAAGCATTCTTTTTGGGATCTCAGTTGCATCTGCACTCACTCCCCAGATGCTTCCCCTCATCATCAATGCATGCCTTGCTAAAGGAGCTCTTGCTATGGCTAAAGACAGATGTATTGTCAAAAGTTTAACAGCTATACGCCACATGGGGTCAATGGATATCCTTTGTATTGACAAGACAGGTACACTGACAATGAACCGTGCAATTATGGTTAATCATGTTGATTGTCAAGGATTATCCCAAGAAAAAGTTCTACGCTTTGCATTCCTAAACTCTTACTTCAAGACTGATCAGAAGTATCCTCTTGATGATGCGATTCTGGCATATGTATTTACAGAAGGGTACAGGTTTCAtccatccaagtggaccaagatAGATGAGATTCCCTTTGATTTCATACGAAGAAGGGTGTCTGTCATTTTAGAAACACATGCTGATGCAAAAGACAGTCTCTCTGGCAGGTTCATGGTAACTAAAGGAGCATTGGAGGAAGTAATGAGGGTTTGTTCTTACATTGAGagttttgataaaaatgaaatttcaatcTTCTCTTCGGATCACCATCAgaggatttttaatttggctGAAGAATTGAGCAACGAGGGATTAAGGGTCATAGCAGTAGCTATAAAAAACCTAGAAATGCAGCAAAGACGCGAAACTGGCAAAGGAAGCATGGAAAACGatgagaattttgagaaaggGATGGTGTTCCTTGGCCTCATAACCTTCTTTGACCCACCAAAGGACTCAGCAGAGCAAGCCTTGTGGCGTTTGGCAGAGAAGGGAGTGAAAGCAAAGGTTTTGACTGGAGACTCACTGGCTTTGGCCATGAGGGTGTGCAGAGAAGTTGGCATCAGAACCACCCACGTGATCACAGGGCCTGAGCTAGAGCAAATGGACCAAGAAAATTTCCATGAAACTGTTAAGAGAGCCACTGTGCTAGCTCGGCTCACACCAACTCAGAAACTCCGAGTTGTTCAATCATTGCAGACAAATGGAGACCACGTTGTTGGGTTCCTGGGAGATGGAATAAATGATTCATTAGCTCTAGATGCTGCCAATGTAAGTATTTCAGTGGACTCAGGTGTGGCAATAGCAAAAGACATGGCAGACATCATTCTACTTGAGAAAGATTTGAATGTGCTCGTGGCTGGCGTCGAACATGGTCGGCTAACCTACGGCAACACAatgaaatacataaaaatgtCAATAATTGCTAACCTGGGAAGTGTTCTTTCACTGCTCATAGCAATTTTGTTCCTCAAATATGAGCCATTGACTTCAAGACAGCTTCTGACTCAGAACTTTCTATACAGTGTGGGACAGATAGCAATTCCCTGGGACAAGGTAGGGGAAGAGAGTGTAAAGCAGCCTCAGAGATGGTCTGAGAGAGACTTGCCAATGTTCATACTATGGAATGGTCCTATCTGCACTTTCTGTGACGTGGCAACACTTCTCTTCATATGTTTCTATTACAAGGCTACCAGTGATTTGgatattaaatttttccatTCTGCTTGGTTCATTGAGGGACTTCTCATGCAGACTCTTATCTTCCACTTGATCAGGACTGAGAAAATACCATTCATTCAAGACATTGCCTCTTGGCCTGTGCTTTGTTCTACTCTTCTCATTTCTGCAATTGGAATCACACTGCCATTCTCACCCATTGGCAAGGTCATGGAATTTACAGTTCTACCACTCACATATTTTGGGTTTTTGGTGGTTCTCTTTTTGGTGTATTTTACAATTGGCCAGCTGGTCAAGAGGCTTTATATATTGGTTTATAAAAGATGGCTATG 2843 0.4006 MGRTKLSTIFSVNNHPVLPHSNPISENLVENPSAQKNRFSPYSLFGLLRNLFFAKKDDGGSRTEEEERVYNWLYNLAQSEKDLVFEYVRSTERGLSFKEAERRLRENGPNVPIEYFFPKWWHLIWNALFHPFNIILIVLSVLSFIASDNPNGSIMLTLVFISVSLRFYQEYSSSKAAMRLSEHVRCPIKVQRCAGRVVQTELVVQVDHRDIVPGDIVIFEPGDLFPGDIRLLSSKHLVVSQSSLTGESWATDKTADIREDRSTPLLELKNICFMGTSVVSGNGTGLVVSTGSKTYMSTMFSTIGKKKPPDEFEMSLRWIFYLLVAIILVVVTIIVVTDYSTSLDLSRSILFGISVASALTPQMLPLIINACLAKGALAMAKDRCIVKSLTAIRHMGSMDILCIDKTGTLTMNRAIMVNHVDCQGLSQEKVLRFAFLNSYFKTDQKYPLDDAILAYVFTEGYRFHPSKWTKIDEIPFDFIRRRVSVILETHADAKDSLSGRFMVTKGALEEVMRVCSYIESFDKNEISIFSSDHHQRIFNLAEELSNEGLRVIAVAIKNLEMQQRRETGKGSMENDENFEKGMVFLGLITFFDPPKDSAEQALWRLAEKGVKAKVLTGDSLALAMRVCREVGIRTTHVITGPELEQMDQENFHETVKRATVLARLTPTQKLRVVQSLQTNGDHVVGFLGDGINDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTYGNTMKYIKMSIIANLGSVLSLLIAILFLKYEPLTSRQLLTQNFLYSVGQIAIPWDKVGEESVKQPQRWSERDLPMFILWNGPICTFCDVATLLFICFYYKATSDLDIKFFHSAWFIEGLLMQTLIFHLIRTEKIPFIQDIASWPVLCSTLLISAIGITLPFSPIGKVMEFTVLPLTYFGFLVVLFLVYFTIGQLVKRLYILVYKRWL 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01245 947 SUPERFAMILY HAD-like 578 735 IPR036412 -
Bva10g01245 947 Gene3D - 186 290 - -
Bva10g01245 947 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 395 594 IPR023299 GO:0000166
Bva10g01245 947 Pfam Cation transporter/ATPase, N-terminus 84 143 IPR004014 -
Bva10g01245 947 Gene3D - 399 724 IPR023214 -
Bva10g01245 947 SUPERFAMILY Calcium ATPase, transmembrane domain M 89 944 IPR023298 -
Bva10g01245 947 SMART Cation_ATPase_N_a_2 75 148 IPR004014 -
Bva10g01245 947 Gene3D - 153 897 - -
Bva10g01245 947 SUPERFAMILY Calcium ATPase, transduction domain A 196 302 IPR008250 -
Bva10g01245 947 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 67 946 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PANTHER CATION TRANSPORTING ATPASE 54 946 - -
Bva10g01245 947 SFLD Haloacid Dehalogenase 384 737 - -
Bva10g01245 947 Pfam haloacid dehalogenase-like hydrolase 398 701 - -
Bva10g01245 947 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Bva10g01245 947 Pfam E1-E2 ATPase 196 381 - -
Bva10g01245 947 Gene3D - 414 591 IPR023299 GO:0000166
Bva10g01245 947 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 155 444 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g01245 947 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 654 767 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g01245 947 SFLD p-type atpase 384 737 IPR044492 -
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 315 331 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 763 774 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 436 449 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 795 808 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 850 871 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 815 831 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 900 921 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PRINTS Magnesium-transporting ATPase signature 745 760 IPR006415 GO:0015444|GO:0015693|GO:0016021
Bva10g01245 947 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 54 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01245 Bva-Chr10 8793315 8798365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01245 72 849 Primary Pumps ATPases(2) AT1G07810 25.641 9.06e-57 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01245 K01531 - gmx:100795153 1447.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01245 10 8793315 8798365 Bva10g01245 10 8793315 8798365 ECH