Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01215 ATGGCTGAGACCAGGCGCTATGGTCTTGGTAATCAATTGGATATCGGGCAAATACTCTCAGAAGCACAGCATCGATGGCTGCGTCCAGCtgaaatttgtgaaattcTGCGTAATTATAAGAACTTCCGTATTGCTCCAGAGCCTGCAAATATGCCGCCAAGTGGTTCACTTTTCCTGTTTGATCGGAAGGTGCTGAGATACTTCAGAAAAGATGGCCATAACtggaggaagaaaaaagatggaAAAACAGTGAAGGAAGCTCATGAAAGACTTAAGGCTGGAAGTGTAGATGTCTTGCATTGCTACTATGCCCATGGAGAAGAAAACGAAAGTTTTCAAAGGCGCAGTTACTGGATGCTTGAAGAGGAGCTCTCACACATCGTTCTTGTTCACTATCGGGAAGTAAAGGGAACTagggaaaattttaaatgtgctAAAGACAATGAAGAAGCTCTTCCTTATGTCCAAGAAACTGACAGTATTATGCACACAACAGAGATGGATACTTCTTTATCTTCTGGTCTTCATCCAATCAGTTACCAAGTTCCTTCTCAGACTATGGATACAACTAGCATGAATAGTGCTCAGGCATCTGATTATGAAGAAGCAGAATCTGCTTTCAATAGCCATACAAGTTCCCAATTCCACTCTTTCCTTGAACTGCAACATCCTGTGGTTGAGAAGATTAAAGCTCAAGTCACTGACTCTTGTTACTCTCTGCCATTCTTAAaaaccGTAACAGAAGATCAAGGTCAGCTGTCTGGCATTCCAGGGGAAAATTGTATCTCGCTCAGTCAAGCCAATCAAATCAAGGACATTGATAATGCTGAGCAGAAATATGAACCCCTAAAACACCTTGCCTTCCCATTTTGGAAAGATGCCCTAGAAAATAATTCTGGAAGTCAACCTGTGCCCTTTCAACCATCGTTCCCTAAAACACAACCTGACACCATGGGGATTAACAACAATTCCTCTCAAGGTGAGGATGTTATGGGGCAAAATTTTATCAGAAGTTCAGCAAAGGAGCATTACGATGGGAATTTCATACAAGTTGAAAGAAATTGGCAGGCTACTGGTTATAATAATTCACGCTTGCCCCACTGGCCCACAGATGATCAGCATCCAGATTCAGCTTGTGAAGCAACTTCTAGGTTCTGTGAGCAAGAAGTTAATCATGTGGATTTTCAAAAGCCCTTGGAGGACAATCCTATACATCCAGACAAGCTAAACAACCATCTTATACACAATAACCGCCATGAACACCTTTTGGATGCAAAAGACAGCTATGGTTTAAAACCAGAACTGGGGACTAGTACAAGCCTGGATGGAATAGGTGAGGAAAAGAATCTTTCCACTTTAAAGCAGACTCTGTTAGATGGATCTCCTGCAGAAGGTCTAAAGAAGCTGGACAGTTTCAACCAATGGATGAGCAAAGAACTTGAAGATGTAGAAACGAATATGCAGCCCACTTCTGGTGCCTATTGGGATAAGGTTGAAAGCACAGCTATTTCTTCCCATGTGCACTTTGACACTTATTCTATGGATCCATCTATTTCTTATAATCAGCTTTTCAGCATTATTGACTTTTCACCAAACTGGGCTTATGAAGGCTCAGAAACCAAGGTCCTGATTTCAGGACGGTTCTTAAGTAGTCAAcaagaattagaaaattttaaatggtcATGCATGTTTGGGGAGGTAGAAGTGCCAGCAGAGGTTATCAGCAATGGTGTTCTTCGTTGTCACACTCCACCACTTAAAGCTGGGCGGATTCCTTTCTATATAACATGTTCCAATAGATTAGCATGCAGTGAAGTGCGAGAATTTGATTTCCAAGTCAACCATGTTGGAGAAGTTAACACTGCAGATGACAACAGAGGcaacatttttgaaaaactcAGAACACGACTGGGAGAACTACTGTTCCTGGAGCCCACATTCCCAAAACAATTTCACGCCATTAGTGAGAAATCTAAGCTGGGAAGTAAAATCAGTTCTTTGTTGACAGAAAACAATGACCAATGGGACAAAATTTTGCAACTTACTCTAGAGAGAGATTTTTCTCCAGAAAATGTGCAGGATCAGATGCTTCAAACACTTCTGAAAGAAAAGTTACAGGTATGGCTCCTTCAGAAAATAACAGAAGATGGGAAAGGCCCTAATTTATTAGATGAGGGTGGCCAAGGTGTGCTTCATCTTGCAGCTGCTCTTGGTTATGATTGGGCCCTTCATCCCACAATAGTTGCTGGAGTGAATGTTAACTTTCGTGACATAAATGGATGGAGTGCACTTCATTGGGCAGCCTTTTATGGCAGGGAGCGGACAGTTGCTTCCCTCCTCTCTCTCGGTGCAGCACCAGGATTACTGAGTGATCCATGCCCAAAATATCCGTCTGGTAGAACACCTGCTGACCTAGCTTCTGTTAACGGGCACAAAGGAATTGCAGGGTTTCTAGCAGAATCTGCCCTGAGTGCGCACCTTGATTCTCTTAATATAAACAGGGAAGGTAGTGCTGGAGAAAGTTCTGGGGCAAAAATAGTACAAAGAGTTCAAGAACGAAATACAAGTCAAATTAATGGTGGAAACCTATCATATGAACTGTCATTGAAAGATTCATTGGCTGCTGTTTGTAATGCCACCCAAGCTGCTGCTCGTATTCATCAAGTTTTCAGGGTGCAGTCATTCCAGAGAAAACAATTGAAAGAATATGTTGAGGACAAATTGGAAATATCAGACGAAAATGCTCTTTCACTTATAACAGTTAAGTCACACAAGACTGGACAATATGACGAGCCTGTCCATGCTGCTGCAATACGAATCCAGAACAAGTTCCGAGGCTGGAAAGGCAGGAAAGAATTTTTGATGATTCGGCAACACGTAGTAAAAATTCAGGCCCATGTAAGAGGTCACCAGGTTAGGAAAAACTATAGAAAGATAACATGGTCTGTTGGGATTGTGGAGAAGGTTATTTTACGTTGGCGTCGAAAAGGAACTGGCTTGCGTGGATTTAAACCAGAAGATCTTACGAAGAACGCTATGGTGCAAGATATGTCTTCCAAGGAGGATGACTATGATTTCCTAAAAGAGGGCAGGAAACAAACAGAGGAAAGGTCGCAGAAAGCCCTAGCCAGAGTGAAGTCAATGGTTCAGTATCCAGAAGCCAGAGATCAATACCATAGGCTGTTGAATGTTGTAAATGAGATTCAAGAAACTCAGGTCAAGCGTGATAGTGTTTTGAACAATTCAAAAGAAACAGCTGAATTTGATGACGACGTTGATCTTGGAGCCTTGTTGGACGATGATACCTTCATGTCTATAGCAACTTA 3326 0.4101 MAETRRYGLGNQLDIGQILSEAQHRWLRPAEICEILRNYKNFRIAPEPANMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENESFQRRSYWMLEEELSHIVLVHYREVKGTRENFKCAKDNEEALPYVQETDSIMHTTEMDTSLSSGLHPISYQVPSQTMDTTSMNSAQASDYEEAESAFNSHTSSQFHSFLELQHPVVEKIKAQVTDSCYSLPFLKDQGQLSGIPGENCISLSQANQIKDIDNAEQKYEPLKHLAFPFWKDALENNSGSQPVPFQPSFPKTQPDTMGINNNSSQGEDVMGQNFIRSSAKEHYDGNFIQVERNWQATGYNNSRLPHWPTDDQHPDSACEATSRFCEQEVNHVDFQKPLEDNPIHPDKLNNHLIHNNRHEHLLDAKDSYGLKPELGTSTSLDGIGEEKNLSTLKQTLLDGSPAEGLKKLDSFNQWMSKELEDVETNMQPTSGAYWDKVESTAISSHVHFDTYSMDPSISYNQLFSIIDFSPNWAYEGSETKVLISGRFLSSQQELENFKWSCMFGEVEVPAEVISNGVLRCHTPPLKAGRIPFYITCSNRLACSEVREFDFQVNHVGEVNTADDNRGNIFEKLRTRLGELLFLEPTFPKQFHAISEKSKLGSKISSLLTENNDQWDKILQLTLERDFSPENVQDQMLQTLLKEKLQVWLLQKITEDGKGPNLLDEGGQGVLHLAAALGYDWALHPTIVAGVNVNFRDINGWSALHWAAFYGRERTVASLLSLGAAPGLLSDPCPKYPSGRTPADLASVNGHKGIAGFLAESALSAHLDSLNINREGSAGESSGAKIVQRVQERNTSQINGGNLSYELSLKDSLAAVCNATQAAARIHQVFRVQSFQRKQLKEYVEDKLEISDENALSLITVKSHKTGQYDEPVHAAAIRIQNKFRGWKGRKEFLMIRQHVVKIQAHVRGHQVRKNYRKITWSVGIVEKVILRWRRKGTGLRGFKPEDLTKNAMVQDMSSKEDDYDFLKEGRKQTEERSQKALARVKSMVQYPEARDQYHRLLNVVNEIQETQVKRDSVLNNSKETAEFDDDVDLGALLDDDTFMSIAT 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01215 1104 SMART ANK_2a 794 823 IPR002110 GO:0005515
Bva10g01215 1104 SMART ANK_2a 755 784 IPR002110 GO:0005515
Bva10g01215 1104 SMART iq_5 951 973 IPR000048 GO:0005515
Bva10g01215 1104 SMART iq_5 928 950 IPR000048 GO:0005515
Bva10g01215 1104 Pfam IPT/TIG domain 522 595 IPR002909 -
Bva10g01215 1104 Gene3D - 928 977 - -
Bva10g01215 1104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 921 979 IPR027417 -
Bva10g01215 1104 SMART CG_1_2 18 136 IPR005559 GO:0003677
Bva10g01215 1104 ProSiteProfiles IQ motif profile. 952 976 IPR000048 GO:0005515
Bva10g01215 1104 ProSiteProfiles Ankyrin repeat region circular profile. 755 780 - -
Bva10g01215 1104 ProSiteProfiles Ankyrin repeat profile. 755 787 IPR002110 GO:0005515
Bva10g01215 1104 Gene3D Immunoglobulins 515 611 IPR013783 -
Bva10g01215 1104 SUPERFAMILY Ankyrin repeat 687 816 IPR036770 -
Bva10g01215 1104 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Bva10g01215 1104 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Bva10g01215 1104 ProSiteProfiles IQ motif profile. 930 958 IPR000048 GO:0005515
Bva10g01215 1104 SUPERFAMILY E set domains 522 607 IPR014756 -
Bva10g01215 1104 Pfam IQ calmodulin-binding motif 955 973 IPR000048 GO:0005515
Bva10g01215 1104 Pfam IQ calmodulin-binding motif 930 949 IPR000048 GO:0005515
Bva10g01215 1104 Pfam Ankyrin repeats (3 copies) 727 817 IPR002110 GO:0005515
Bva10g01215 1104 Gene3D - 689 844 IPR036770 -
Bva10g01215 1104 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 1 1068 - -
Bva10g01215 1104 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01215 Bva-Chr10 8603374 8610078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01215 1 1103 CAMTA Transcription Factor Family AT5G64220 46.243 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bva10g01215 Ank_2 2.6e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01215 K21596 - gmx:100798875 1480.69