Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01208 ATGTGTGGGATTCTTGCAGTCTTAGGTTGCACTGACAACTCTCAGGCCAAGCGCGCTCGCATTCTCGAATTGTCATGGAGGTTGCGACACAGAGGTCCTGATTGGAGTGGCTTGCATTGCcatgaaaattattatcttgCCCATCAGCGTCTGGCTATAGTGGACCCTACTTCGGGGGATCAACCCCTCTATAACGAAGACAAGACTGTAATTGTCACTGTAAACGGAGAGATTTATAACCATGTCCAATTGAGAAAGAAACTTAGCTCTCATCAATTTCGAACTGGAAGTGATTGCGAAGTGATTGCCCATCTTTATGAAGAATATGGAGAAGACTTTGTCGATATGTTGGATGGGATGTTCTCCTTTGTCCTCCTCGACACCCATGATAATAGTTTTATCGCAGCTCGTGATGCTATTGGTATTACCCCTCTTTATATGGGCTGGGGTCTTGATGGATCAATTTGGTTTGCGTCTGAAATGAAAGCTTTGAGTGATGATTGTGAGAGATTCATAAGTTTTCCTCCTGGCCATATATATTCCAGCAAACTGGGAGAAATGAGAAGGTGGTATAACCCACCATGGTATCCAGAGCATATTCCATCAATGCCATATGATTCAATGATCTTACGTGAGGCTTTTGAGAAGGCTGTAGTTAAGAGACTAATGACTGATGTACCATTTGGGGTTCTTTTGTCTGGAGGACTGGACTCTTCACTTGTTGCTGCTGTGGCCACTCGCCACCTGGGTGAAGTTGCCGCTGCTTGTCAGTGGGGAACACAGTTACATACCTTCTCAGTTGGTTTGAAGGGCTCTCCGGATTTGAAAGCTGCTAAAGAAGTAGCTGATTATCTAGGTACTCGTCACCATGAATTTCATTTCACTGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATATACCATGTTGAAACATATGATGTAACAACAATCAGAGCAAGCACTCCTATGTTTCTTATGTCCCGGAAAATTAAATCCTTGGGAGTGAAAATGGTTCTGTCTGGAGAAGGTGCAGATGAAATATTTGGAGGCTACCTGTATTTCCATAAAGCCCCTAACAAGGAAGAGTTTCACCAAGAAACCTGTCGAAAAATTAAAGCTCTTCATCTTTATGATTGCCTGAGAGCCAATAAATCAACTTCGGCTTGGGGTGTAGAGGCGCGTGTACCATTCTTAGATAAAGAATTTATCAACACAGCCATGAGCATGGATCCTGAGTGGAAAATGATACGACCTGATCTTGGAAGAATAGAGAAATGGGTCCTTCGCAATGCGTTTGATGATGATCAGAATCCATATTTGCCAAAGCACATATTGTACAGGCAGAAAGAACAGTTCAGTGATGGTGTTGGCTACAGCTGGATCGATGGCTTGAAGGATCATGCAAGCAAACAAGTAACAGATGCAATGTTGGCCAATGCAAGTTTTGTATATCCTGAAAACACTCCTACCACGAAAGAAGCATACTACTACAGGACcatttttgagaaattcttTCCAAAGAATGCTGCTAGGTCAACAGTTCCTGCAGGTCCTAGTGTGGCTTGCAGCACAGCCAAGGCCGTGGAATGGGATGCAGCATGGTCGAAAAATCTTGACCCTTCTGGTCGTGCTGCCATTGGTGTTCATGCAGCAGCGTATGACGAAGCAGAAAATGCCAAGCCTATCAACGGaatata 1700 0.4312 MCGILAVLGCTDNSQAKRARILELSWRLRHRGPDWSGLHCHENYYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHVQLRKKLSSHQFRTGSDCEVIAHLYEEYGEDFVDMLDGMFSFVLLDTHDNSFIAARDAIGITPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKLGEMRRWYNPPWYPEHIPSMPYDSMILREAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVATRHLGEVAAACQWGTQLHTFSVGLKGSPDLKAAKEVADYLGTRHHEFHFTVQEGIDALEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGADEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSMDPEWKMIRPDLGRIEKWVLRNAFDDDQNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHASKQVTDAMLANASFVYPENTPTTKEAYYYRTIFEKFFPKNAARSTVPAGPSVACSTAKAVEWDAAWSKNLDPSGRAAIGVHAAAYDEAENAKPINGI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01208 566 Gene3D HUPs 195 514 IPR014729 -
Bva10g01208 566 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 558 - -
Bva10g01208 566 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Bva10g01208 566 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Bva10g01208 566 PANTHER ASPARAGINE SYNTHETASE 1 558 - -
Bva10g01208 566 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 197 484 - -
Bva10g01208 566 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Bva10g01208 566 PIRSF Asn_synthetase_glu-h 356 545 IPR006426 GO:0004066|GO:0006529
Bva10g01208 566 PIRSF Asn_synthetase_glu-h 1 362 IPR006426 GO:0004066|GO:0006529
Bva10g01208 566 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Bva10g01208 566 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Bva10g01208 566 CDD AsnB 2 192 IPR033738 -
Bva10g01208 566 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01208 Bva-Chr10 8568926 8573974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01208 61 164 PRT Gene Family AT4G38880 33.621 2.18e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01208 K01953 - cit:102618937 1056.2