Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01196 ATGATTGGAAAGGAAAGCGAAGGAGTAAAAGCAGAGCTGCTGGTTTTTGGTGCCAATTGCTTGTTTTGCGGAGTTGAACATAATTGCCAGTTTTGGGAGCTTGTGGCTGTAACTATAAATCCACCACTGGGGGCTCATACCCATTACATACACACACGTACACACTCCCTCCCTCGCCTTCTCTATTCATTTCTCTCTGCGTCTCTTCCTCTGTTTCCTCGTTCTCTCTCAGGAGCTTTGCTTATTCTTAAACCACTCGGATCCAACCCGGTTACCTACCCAGTTCCGGCTTTGCTCAGCCTGAAAACTAGTATTTCTGTCGCTTGTTTCTCTGTTTCTTCACCCTATACTATAAACTTACTAGACAGATTCGAAGGTTGTCCCTTTTCTTCAAGtgagattctaaaagaaaagatgacgCAGCAGAATGTGGTGGTGTCTGATCCCAAATCAGGGATCAACATGGCTATCACCGTTGCCGTATCGAACTCTTCGATATTCACGACGTCGGTGCAGAAACCGCCGGCGGCACAAGGAGGGTACATTTCCATTTCAAGGAAAAAGTTTCTAAAGAACCTTGAAATCAATGGACTTGGGGGAGCAAGAATTAATGCTTGGGTTGACTCCATGAGAGCCTCTTCTCCAACCCATGTCAAATCCAATTCCACCCCTTCATTGGCCGATGACCACCATAGCTCTTGGATTGTTCGCCACCCATCCGCATTAGACATGTTCGAGGAAATAATCGATGCTTCAAAAGGGAAGCAAATTGTCATGTTTCTGGATTATGATGGTACACTGTCACCTATAGTAGAGGACCCCGACCGTGCTTTCATGTCTGATGCGATGAGAAAGACAGTGAGAAAGCTGGCCAGATGTTTTCCAACTGCTATAGTGAGTGGCAGATGCAGAGACAAGGTATACAACTTTGTTCGCTTGGCAGAGCTATATTATGCCGGAAGCCATGGAATGGACATTAAAGGTCCAACAACAAGCTCCAAATACAACCAAGACAGCGAAGCAATTCTTTTTCAACCTGCCACTGAATTTCTTCCAATGATAGACGAAGTGTACCAACAGTTAGTTGAGAAAACTAAATCAACCCCAGGAGCAATAGTGGAAAATAATAGGTTCTGTGTGTCTGTTCACTTCCGCTGCGTTGATGAAAAGAAATGGAGTGAACTAGCACACCAAGTTAGATCAGTGTTGAAAGGGTACCCGAAGCTTCGTCTTAACCAAGGCAGAAAGGTATTGGAGATTCGACCCATTATTAAATGGGACAAGGGAAATGCTttggaatttttattagaCTCGCTCGGGTTTGCCAACTGTACCGATGTTTTTCCTGTTTACATTGGAGATGATCGAACCGATGAAGATGCATTTAAGAAATTAAGAGACAGAGGACAAGGTTTTGGCATTCTTGTCTCTAAATTTCCCAAAGACACCTGTGCATCTTACACTTTGCAGGAACCAGATGAGGTTATGGATTTTCTGCAACGTTTGGTAGACTGGAAACGACTATCACTGCGGGCACATTCTAGAGTGTA 1550 0.4342 MIGKESEGVKAELLVFGANCLFCGVEHNCQFWELVAVTINPPLGAHTHYIHTRTHSLPRLLYSFLSASLPLFPRSLSGALLILKPLGSNPVTYPVPALLSLKTSISVACFSVSSPYTINLLDRFEGCPFSSSEILKEKMTQQNVVVSDPKSGINMAITVAVSNSSIFTTSVQKPPAAQGGYISISRKKFLKNLEINGLGGARINAWVDSMRASSPTHVKSNSTPSLADDHHSSWIVRHPSALDMFEEIIDASKGKQIVMFLDYDGTLSPIVEDPDRAFMSDAMRKTVRKLARCFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGPTTSSKYNQDSEAILFQPATEFLPMIDEVYQQLVEKTKSTPGAIVENNRFCVSVHFRCVDEKKWSELAHQVRSVLKGYPKLRLNQGRKVLEIRPIIKWDKGNALEFLLDSLGFANCTDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTCASYTLQEPDEVMDFLQRLVDWKRLSLRAHSRV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01196 516 Pfam Trehalose-phosphatase 260 492 IPR003337 GO:0003824|GO:0005992
Bva10g01196 516 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 160 515 - -
Bva10g01196 516 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 259 468 IPR006379 -
Bva10g01196 516 TIGRFAM T6PP: trehalose-phosphatase 255 503 IPR003337 GO:0003824|GO:0005992
Bva10g01196 516 CDD HAD_TPP 258 496 - -
Bva10g01196 516 SUPERFAMILY HAD-like 258 505 IPR036412 -
Bva10g01196 516 Gene3D - 339 423 - -
Bva10g01196 516 Gene3D - 259 489 IPR023214 -
Bva10g01196 516 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 160 515 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01196 Bva-Chr10 8472535 8476562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01196 253 504 Trehalose Biosynthesis Gene Families AT1G70290 27.037 1.49e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01196 K01087 - rcu:8261645 622.083