Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01195 ATGGCTGCTGCTATAGATATGTATAATTTCAACATAACACCAGATTTCTCAGATCCCTATAGTGAAGAGCTGATGAGAGCACTTGAACCTTTTATCAGAAGTGATTCGTCTTGCTCTTACACTTCAGTTTCTTCCTTTCTGCCCAATCTGTATCCCAACGTGGGCTTCTCGAGCTTTGACCTAAAAGAGGCTGAGCAGAGAAGCCCCATAGGGCTTAATCAACTCACAACATCTCAAATTCTTCAGATTCAAGCTCAATTCCAGCTCcaacagcaacagcaacagcaGAAAGTTTCTAGCTTCCCTGCAGATTCCCTGAAATACCAGTTGCTTGGGCCCAAAGCCATCCCCATGAAGCATTCGGGTATTCCTCTGAAACCCACGAAACTATACCGTGGAGTAAGACAGCGGCATTGGGGGAAATGGGTTGCAGAGATCAGACTCCCCAAGAATCGCACCCGTCTCTGGCTCGGCACTTTCGACACGGCGGAGGAGGCGGCGTTGGCTTATGATAACGCAGCACATAAGCTAAGGGGAGAGTTTGCTCGCCTTAATTTTCCTCATCTCCGACACCAGGGAGCTCATGTCTTCGGTGAATTCGGCGATTACAAGCCTCTCCATTCCTCTGTCGATGCCAAGCTTCAAGCAATTTGTGAAACCTTGGCTAATTCCCAGAAAGCCAAAACCTGTTCCGTTTCCGATGCCGATGTAAAGCCTAAGATACAGGCTCCTTCCCTGCCACCGCCTCCGCTGCAGCAGCCAAAACCTGTGTTCGATGAGGTGAAACCAAAAAGGGAATTCGCGGTTGCAGAATTGGAGGAGGATTATAAAGTGGAAAACCCAACATCATCGTCATCCGATGAATGGTCTGCTGGTTCGTCTTCACCTGAATCCGATGTaactttctttgatttctcGGGTTCCAACtgggatgaaaatgaaagcaacaaCTTTGGGTTGTCCAAGTATCCTTCGGTGGAGATTGACTGGGCAGCTATCTG 1001 0.4565 MAAAIDMYNFNITPDFSDPYSEELMRALEPFIRSDSSCSYTSVSSFLPNLYPNVGFSSFDLKEAEQRSPIGLNQLTTSQILQIQAQFQLQQQQQQQKVSSFPADSLKYQLLGPKAIPMKHSGIPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAHKLRGEFARLNFPHLRHQGAHVFGEFGDYKPLHSSVDAKLQAICETLANSQKAKTCSVSDADVKPKIQAPSLPPPPLQQPKPVFDEVKPKREFAVAELEEDYKVENPTSSSSDEWSAGSSSPESDVTFFDFSGSNWDENESNNFGLSKYPSVEIDWAAI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01195 333 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
Bva10g01195 333 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Bva10g01195 333 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Bva10g01195 333 MobiDBLite consensus disorder prediction 272 297 - -
Bva10g01195 333 CDD AP2 129 189 IPR001471 GO:0003700|GO:0006355
Bva10g01195 333 Gene3D AP2/ERF domain 130 188 IPR036955 GO:0003700|GO:0006355
Bva10g01195 333 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 1 333 - -
Bva10g01195 333 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Bva10g01195 333 MobiDBLite consensus disorder prediction 282 297 - -
Bva10g01195 333 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Bva10g01195 333 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 333 - -
Bva10g01195 333 Pfam AP2 domain 131 180 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01195 Bva-Chr10 8456746 8458206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01195 1 333 AP2-EREBP Transcription Factor Family AT1G78080 44.693 4.68e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva10g01195 AP2 5.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01195 K09286 - tcc:18611594 338.191