Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01185 ATGAGTTCCACCTGCAAAATGGAGGGCATGGAGTTGGGCATCATTGACGAGAGCACCACTGAGGAGGAATCTGTGACTTCTCAGTGGGTTCTCAATTCTCCCGCGCCCCCAACTCCATGGCGTGAGCTTGCAGATTCTGCCACCAAAACGGTGGCGCAGTGTGGAGAAAAGTTTTCCTCACTCAGAGACCACCAGCAAGCACCCAAGCTTGTGCTCTCAGTGTTGCTGGGAATTTTCCCCATTCTTCAGTGGGGACAAAACTATACTGTAACCAAATTCCGGAACGACTTACTCGCAGGTCTAACCATTGCAAGTCTTTGTATTCCTCagAGTATTGGTTATGCGACTTTGGCACACCTTGCTCCTCAATATGGCCTTtATACAAGTGTTGTGCCACCTCTGATCTATGCTGTAACGGGAAGTTCAAGAGAGATAGCAATTGGACCAGTGGCGGTGGTGTCGCTGCTTCTGTCCTCAATGGTTCAGAAATTAATAGACCCTGCTTCTGATCCAACTGGCTATACAAAGCTTGTCTTGACTGCCACTCTCTTTGCTGGCATCTTCCAGGCTTCCTTCGGACTCCTCCGgTTGGGGTTCCTTGTGGATTTTCTGTCCCATGCTTCTATAGTTGGATTTGTGGCTGGAGCAGCCATTGTAATTGGGCTTCAACAGTTGAAAGGATTGCTGGGGCTTACTCATTTTACAAACAAAACTGACATAGTCTCTGTCCTTAAAGCTGTTGTGAAATCATTTCATCATCCCTGGAATCCTTGTAATTGTCTCCTCGGATCTTCCTTCTTGATCTTCATTCTATTGACCAAGTTTTTGggtaaaaggaagaagaaactatTCTGGCTGCCAGCAATCTCTCCTCTATTATCCGTGGTGCTATCAACCCTGATTGTATTTCTAACAAGGGCTGATAAAAAAGGAGTCAATATCGTGAAACACATCAAAGGAGGAATTAATCCAAGTTCAATCCATCAGTTAGACTTTAATAGCCCCTATGCTGGAGAAGTGGCCAAAATTGGACTAATTGTTGCTGTTGTTGCCCTCACTGAATCAGTTGCTGTTGGGCGATCCTTTGCATCTATAAAGGGATACCACCTTGATGGAAATAGGGAAATGGTGTCAATAGGTTTCACCAACATCGTAGGATCTTTCACCTCTTGCTATGTTGCAACTGGATCATTTTCCCGTACGGCAGTTAATTTCGCGGCCGGTGTTGAAACATCGGTGTCAAACATTGTTATGGCGACCACTGTGTTCTTGTCACTGCAATTCTTCACGAAGCTATTGTATTTCACTCCAACAGCAATTATTGCTTCAATAATCATTTCTGCTCTACCTGGACTCATCGATCTCAGCGAAGCTTACAAAATCTGGAAGCTTGACAAACTAGACTTCCTTGCTTGCTCCGCAGCATTCTTTGGAGTCCTTTTCGCCTCTGTCGAAATTGGTCTGCTACTCGCGGTGGTCATATCGTTTTCAAAGATCATTCTGATCTCAATTCGACCTGGCACAGAAGCTCTAGGGAAACTTCCGGGGACTGATATGTTTGGTGATATTAATCAGTATCCAATGGCTGTTAAGACTCCAGGGGTTGTAATAGTACGCGTCAAGTCTCCCTTGCTTTGCTTTGCAAATGCCAATTTCATTAGagaaaggaTTATGAAATGGGCCACTCAAGAAGAAGCAAAGGACAACAAAGAAAGCACCACAAAGACCATTCAACTAGTAGTGCTAGACATTTCCAATTTAGTGAACATCGATACTTCTGGAATTGCTTCTCTCGAGGAACTGCACAGGTGTTTGGTCTGTCAAGGAAAGCAGCTAACAATTGCGAACCCAAGGTGGCAAGTGATTCACAAACTCAAGACAGCTGACTTTGTGAGCAAAATTGGAGGAAACGTCTTCTTAACTGTTGGAGAAGCCGTTGAATATGCAAACCACAATGCTAATTGCTTGAATGCTTA 1976 0.4388 MSSTCKMEGMELGIIDESTTEEESVTSQWVLNSPAPPTPWRELADSATKTVAQCGEKFSSLRDHQQAPKLVLSVLLGIFPILQWGQNYTVTKFRNDLLAGLTIASLCIPQSIGYATLAHLAPQYGLYTSVVPPLIYAVTGSSREIAIGPVAVVSLLLSSMVQKLIDPASDPTGYTKLVLTATLFAGIFQASFGLLRLGFLVDFLSHASIVGFVAGAAIVIGLQQLKGLLGLTHFTNKTDIVSVLKAVVKSFHHPWNPCNCLLGSSFLIFILLTKFLGKRKKKLFWLPAISPLLSVVLSTLIVFLTRADKKGVNIVKHIKGGINPSSIHQLDFNSPYAGEVAKIGLIVAVVALTESVAVGRSFASIKGYHLDGNREMVSIGFTNIVGSFTSCYVATGSFSRTAVNFAAGVETSVSNIVMATTVFLSLQFFTKLLYFTPTAIIASIIISALPGLIDLSEAYKIWKLDKLDFLACSAAFFGVLFASVEIGLLLAVVISFSKIILISIRPGTEALGKLPGTDMFGDINQYPMAVKTPGVVIVRVKSPLLCFANANFIRERIMKWATQEEAKDNKESTTKTIQLVVLDISNLVNIDTSGIASLEELHRCLVCQGKQLTIANPRWQVIHKLKTADFVSKIGGNVFLTVGEAVEYANHNANCLNA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01185 658 CDD STAS_SulP_like_sulfate_transporter 526 642 - -
Bva10g01185 658 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 17 647 - -
Bva10g01185 658 Pfam STAS domain 526 645 IPR002645 -
Bva10g01185 658 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Bva10g01185 658 Gene3D STAS domain 505 653 IPR036513 -
Bva10g01185 658 ProSiteProfiles STAS domain profile. 525 649 IPR002645 -
Bva10g01185 658 TIGRFAM sulP: sulfate permease 80 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva10g01185 658 SUPERFAMILY SpoIIaa-like 530 650 IPR036513 -
Bva10g01185 658 Pfam Sulfate permease family 93 474 IPR011547 GO:0016021
Bva10g01185 658 PANTHER SULFATE TRANSPORTER 17 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01185 Bva-Chr10 8399022 8404089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01185 21 647 Inorganic Solute Cotransporters AT5G10180 68.153 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01185 K17469 - gmx:100781327 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01185 10 8399022 8404089 Bva10g01185 10 8399022 8404089 ECH