Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01178 ATGcacgCTATTTCTCTTACGCTATCTTTCTCTccatttctctcttcctttatcTCCTTCTCCCTTCCCTTCTACGAAACCAATACATGCATCACTGAGCTTACATGTTTCTCAGTCTCTGAAGGAGGCGTTAATGTTCTGACTGTCTCTCCCATGGCTTGGAGGTTGTCTCCCAACAATGGCAGCAGCCTTGCTGCGAATGATATGGAAAGAAATGGTGAGGGGAAGGCACCAGATTCGGAGCCTCCAACTCCACATTCTGTTCTAAAGATGGGATTGAGGGAACGAAGCAGCAACATGGAGGATCCAGATGGGACATTGGCAAGTGTTGCTCAATGCATTGAACAATTACGTCAGAGTTCATCATCTGCGCAAGAGAAAGAGTATTCTTTGAGACAGCTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCTGTACTTGTTTCTCTTCTGCGGTCTGGATCATTGAGTGTGAAGATACAGGCAGCTACTGTCTTGGGTTCCCTCTGTAAAGAAAATGAGCTGAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTGGTTTACTCAAGTCCAGCTCAGCCGAAGGCCAAGTTGCTGCTGCAAAGACTATTTATGCTGTTTCTCAAGGTGGTGCTAAAGATCATGTTGGGTCAAAAATTTTTTCAACAGAAGGAGTTGTTCCAGTGCTCTGGGAGCAGCTTGAAAAGGGGATGAAGACGGGAAATGTGGTTGATAGTTTATTGACTGGAGCATTGAAAAACCTATCCAGCAGTACTGAGGGATTTTGGAATCTAACAATTCAAGCTGGGGGAGTGGACATATTAGTAAAGTTACTGACAACTGGACCATCTAACACTTTAGCTAATGTGTGTTTTTTACTTGCCTGCATGATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTAACAGCAGAGGCCACAAAACAACTACTCAAGCTACTAGGGCAGGGTAATGATGCCCCTGTTAGGGCTGAAGCAGCTGGTGCTCTTAAATCACTTTCTTCCCAGTGCAAAGAAGCAAGGCGGGAGATAGCTAATTCTAATGGCATTCCTGCTCTGATCAATGCTACTATAGCTCCTTCTAAAGAATTTATGCAGGGGGAGTATGCTCAAGCATTACAAGAGAATGCTATGTGCGCTTTAGCAAACATATCTGGTGGTTTGTCTTATGTCATTGCCAGCCTTGGTCAAAGTCTTGAATCATGCTCCTCTTCTACCCAAATTGCTGACACATTAGGGGCTTTAGCATCTGCTCTTATGATATATGATAGCAAGGCAGAATCTACTAGAGCATCAGATCCTTTGGTAGTTGAGCAGACACTGCTCAAGCAATTCAAACCTCGCTTGCCTTTCCTTGTGCAGGAACGAACCATTGAAGCCCTGGCCAGTCTGTATGGTAATCCCATACTCTCAATGAAACTTGCAAACTCTGATGCAAAACGTTTGCTTGTTGGTTTAATTACAATGGCTACCAATGAAGTGCAAGATGAGCTTACAAAAGCTCTCTTGACACTGTGCAATAATGAAGGTAGTCTCTGGCGTGCACTTCTAGGCCGTGAAGGAGTTCAGCTCTTGATATCTCTTCTTGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCCCTTCTTTGCCTTCTAtctaatgaaaatgatgaaagtaAATGGGCCATTACTGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAGGCAAAGGAAGATTCAGCAACAATCCTTAGGAATCTGTGCAACCATAGTGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCACTACTTTGGCTATTGAAGAATGGAAGCCCAAATGGAAAGGAGATAGCAGCAAAGActttaaatcatttaattcataaatctgATACAGCGACTATCAGTCAACTTACAGCTTTATTAACTAGTGATCAACCTGAGTCTAAGGTTTATGTTTTGGATGCCCTGAGAAGTATGCTTTCTGTTGTTCCTTTTAGTGACATTCTACGTGAAGGTAGTGCTGCAAGTGATGCAATTGatacaatgataaaaatattgaactcCACTAAGGAAGAAACTCAGGCGAAGTCCGCATCTGCTCTGGCAGGAATTtttgaaacaaggaaagacttGCGTGAAAGCAGCATTGCTGTTAAAACTCTTTGTTCAGCCATGAAATTGCTTAATAATGAATCTGAAAGTATCCTGATGGAGTCGTCACGCTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAATAGGGATGTAGCTGCTATTGCTAGAGACGCATTATCCCCCTTAGTCATGCTAGCTAACTCTTCTGTTTTGGAAGTTGCAGAGTTGGCAACGTGTGCTGTGGCAAATCTTATTTTGGATGGTGAAATTTCAGAGAAAGCTGTTGTGGAAGAAGTTATATTACCTGCTACCAGAGTATTACGTGAAGGCACAATTTCTGGGAAAACCCATGCTGCAGCCGCAATTGCTCGCCTATTGCATTCTAGGCGAGTTGATTATGCTGTTACTGATTGTGTAAATCGTGCTGGCACTGTTCTtgctttggtttcttttctaGATACTGCTGTTGGTGGAGCTGTTGCCACATCAGAGGCTTTAGAAGCACTTGCCATTCTGTCCCGGTCAGAAGAGACCAGTGCACATGTCAAACCTGCTTGGGCCGTATTGGCTGAATTCCCTAAAAGCATAAGGCCAATAGTCTTGTCTATTGCTGATTCAACACCAATGTTGCAGGATAAAGCTATCCAGATATTATCTCGATTATGCAAGGATCAGCCTGTTGTTTTAGGAGAAACTGTTGCTACTGCCTCtggatatatattatcatcaaTAGCTAAGAGGATAATCGGttccaaaaatattaaggTCAAAATTGGGGGAGCTGCCGTACTCATTTGTGCTGCAAAAGTAAATCACCAGAGACTGGTGGAAGATCTGAATCAATCAAACTTGTGTGCTGATCTTATCCAGTCTCTTGTGATGCTTGTTCCTGAAGACGCTTCTTTGGGTAATCAGAGTGCTGACAGCGAAGAATGCATCAGCATTTGGAGGAATACAAAAGAAGCCAACGGTGGTCAATCTAACACAGGCACAAGCATTATATATGGTGCCAGCTTAGCTATATGGTTACTGTCTGTTCTTGCTTGTCATGATGAGAAAAGCAAAACTGCAATTATGGAGGCTGGAGCAATTGAGGTTCTCATTGACAGGATCTCAAACTGTTTCTCACAATATACTCAGATGGATTATAAAGAAGATAGCAGCATGTGGATTTGTGCTTTGTTGTTGGCAATATTATTTCAAGATAGAGATATCATACGAGCAAATGCAACCATGAAATCAATACCGGCACTGGCAAATTTATTGAAGTCGGAGGAATCAGCAAATAAATACTTTGCTGCACAATCAATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTACTGTCCGTTGCAAATTCTGGTGCAGCTGGTGGACTTATCTCCTTGCTTGGTTGTGCCGATACTGATATACAGGATTTACTAGATTTGTCAGAGGAATTCTACTTGGTGCGTAATCCTGATCAAGTTGCTCTTGAGAGGTTGTTCAGAGTTGATGACATAAGGGTTGGTGCCACTTCTCGGAAGGCTATACCTGCCCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGGGCACCGTTTTTAGCACTTGGGCTTCTGACTCAGCTTGCTAGAGATTGTCCATCAAATAAGATTGTAATGGTGGAATCTGGGGCCTTGGAGGCACTTACTAAGTACCTTTCACTGGGTCCACAAGATGCAACTGAAGAAGCTGCTACTGATCTGTTAGGAAATTTGTTTAGCAGTGCTGAGATACGGAAACATGAGTCGGCATTTGGTGCTGTTACTCAACTTGTAGCTGTCCTACGCTTAGGTGGAAGAGGTGCAAGGTATAGTGCTGCAAGAGCCTTGGAAAGTTTATTCTCAGCTGACCACATTAGGAATGCAGAGACAGCTCGACAAGCTGTTCAACCATTGGTCGAGATTCTAAATACTGGTCTAGAGAGGGAACAGCATGCTGCAATTGCTGCATTGGTTAGGCTACTGAGTGAAAATCCATCAAGGGCGCTTGCTGTTGCAGATGTTGAAATGAATGCAGTGGATGTACTTTGCAGGATCCTTTCATCAAATTGTTCAATGGACCTCAAAGGAGATGCTGCTGAATTATGTTGTGTTCTTTTTGGGAATACAAGGATCAGATCCACATTGGCTGCTGCACGCTGTGTTGAACCTCTAGTCTCTCTCCTTGTCACAGAGCTTAGTCCTGCTCAGCATTCAGTTGTCCGTGCATTGGATAGGCTTGTAGATGATGAACAACTGGCAGAACTAGTTGCTGCACATGGTGCCGTAATTCCTCTTGTTGGCCTACTTTATGGTAAAAATTATGTGCTTCATGAGGCCATCTCCAGAGCTCTTGTCAAGTTAGGGAAAGACAGGCCTGCTTGTAAAATGGAGATGGTGAAAGCTGGAGTTATTGAAAGCGTACTTGACATCCTTCATGAAGCACCTGACTATCTATGTGCGGCTTTTGCAGAACTGCTGCGTATTTTGACCAATAATGCCAGCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCCTTATTTTTGTTGCTGACTAGACAAGAATTTGGGCCTGATGGACAGCATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACATCCTCAATGTCGTGCAGACTATTCATTGACCTCTCACCAAGCTATTGAACCACTTATCCCCTTGCTTGATTCTCCAATATCAGCAGTGCAACAGTTAGCTGCTGAACTTCTCTCGCATCTTCTTTTGGAAGAACACCTTCAGAAGGATCCAGTGACACAACAAGTGATTGGCCCTCTTATACGAGTTCTTGGTTCTGGTGTACACATATTGCAGCAGAGAGCTATGAAGGCCCTTGTTAGTATTGCACTAACATGGCCAAATGAAATAGCAAAAGAAGGTGGTGTTATTGAAATTTCCAAAGTGATACTGCAAGCTGATCCTTCCCTTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTATCGAGTATTCTGCAATTTAGTTCTGAGTTCTACTTGGAAGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTCGATCTGGCTCAGAGAGCAATGTTATTGGTGCGTTAAATGCTCTTCTAGTGTTGGAGAGTGATGATGGAACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTCTTGGAACTTCTGCGATCTCATCAATGTGAGGAAACTGCAGCAAGACTCTTGGAAGTATTGCTGAACAATGTTAAGATCCGGGAAACAAAAGCCATTAAATCGGCCATCTTACCATTGTCCCAGTACCTCTTGGATCCACAAACTCAAGCACAGCAGGCAAGGTTACTGGCAACTTTGGCTCTTGGTGATCTGTTCCAGAACGAGGGTCTTGCCAGGACAGCTGATGCAGTTTCAGCCTGTCGTGCTTTGGTAAATGTGCTTGAAGACCAGCCTACAGAAGAAATGAAAGTTGTAGCCATATGTGCTCTGCAAAATCTTGTAATGTACAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTTATTGGTTCAAGTGACCCAGAAACATCTCTTCAAGCTGCAATGTTTGTTAAACTTCTCTTCTCTAATCATACCATTCAAGAGTATGCTTCTAGTGAAACTGTCAGAGCAATAACTGCTGCTATTGAGAAGGATTTATGGGCTACTGGAACTGTGAATGATGAGTATCTGAAAGCCTTGAATGCTCTTTTTAGCAACTTCCCACGACTGAGAGCAACAGAGCCGGCAACACTTAGCATTCCCCATCTGGTGACATCCTTAAAGACAGGCTCAGAGGCCACTCAAGAAGCTGCCTTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCCGCATGCCCAGCAGATGTTTCAAGAGCTCAGTCAATAGCAGCTGCAGATGCTATTCCCTTGCTGCAGTACTTAATCCAGTCTGGCCCACCTCGCTTTCAGGAGAAGGCAGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTCGTGATCATCAAGCGCGGGAACAACATGAAGCAGTCAGTTGGAAACCCCAGTGTTTTCTGTAAGCTCACACTTGGCAATACTCCTCCAAGGCAAACCAAGGTGGTCTCAACCGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGACATTTGAGAGTCCTCCTAAAGGCCAGAAGCTTCATATTTCTTGTAAAAATAAGAGCAAAATGGGAAAGAGTTCATTTGGAAAAGTAACAATCCAGATTGATCGAGTTGTAATGCTAGGAGCGGTAGCTGGAGAGTACACTTTATTGCCGGAAAGTAAAAGTGGCCCATCAAGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAGTG 6593 0.4294 MHAISLTLSFSPFLSSFISFSLPFYETNTCITELTCFSVSEGGVNVLTVSPMAWRLSPNNGSSLAANDMERNGEGKAPDSEPPTPHSVLKMGLRERSSNMEDPDGTLASVAQCIEQLRQSSSSAQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWEQLEKGMKTGNVVDSLLTGALKNLSSSTEGFWNLTIQAGGVDILVKLLTTGPSNTLANVCFLLACMMMEDASVCSKVLTAEATKQLLKLLGQGNDAPVRAEAAGALKSLSSQCKEARREIANSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVIASLGQSLESCSSSTQIADTLGALASALMIYDSKAESTRASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSMKLANSDAKRLLVGLITMATNEVQDELTKALLTLCNNEGSLWRALLGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDQPESKVYVLDALRSMLSVVPFSDILREGSAASDAIDTMIKILNSTKEETQAKSASALAGIFETRKDLRESSIAVKTLCSAMKLLNNESESILMESSRCLAAIFLSIKENRDVAAIARDALSPLVMLANSSVLEVAELATCAVANLILDGEISEKAVVEEVILPATRVLREGTISGKTHAAAAIARLLHSRRVDYAVTDCVNRAGTVLALVSFLDTAVGGAVATSEALEALAILSRSEETSAHVKPAWAVLAEFPKSIRPIVLSIADSTPMLQDKAIQILSRLCKDQPVVLGETVATASGYILSSIAKRIIGSKNIKVKIGGAAVLICAAKVNHQRLVEDLNQSNLCADLIQSLVMLVPEDASLGNQSADSEECISIWRNTKEANGGQSNTGTSIIYGASLAIWLLSVLACHDEKSKTAIMEAGAIEVLIDRISNCFSQYTQMDYKEDSSMWICALLLAILFQDRDIIRANATMKSIPALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLDLSEEFYLVRNPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGNLFSSAEIRKHESAFGAVTQLVAVLRLGGRGARYSAARALESLFSADHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMDLKGDAAELCCVLFGNTRIRSTLAAARCVEPLVSLLVTELSPAQHSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGKNYVLHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPISAVQQLAAELLSHLLLEEHLQKDPVTQQVIGPLIRVLGSGVHILQQRAMKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESNVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKAIKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTADAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSLQAAMFVKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNDEYLKALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPADVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVFCKLTLGNTPPRQTKVVSTGPNPEWDESFSWTFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLEIEFQWSNK 2197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01178 2197 Gene3D - 694 841 IPR011989 -
Bva10g01178 2197 Gene3D - 1231 1404 IPR011989 -
Bva10g01178 2197 MobiDBLite consensus disorder prediction 60 88 - -
Bva10g01178 2197 SUPERFAMILY ARM repeat 706 1205 IPR016024 -
Bva10g01178 2197 ProSiteProfiles C2 domain profile. 2057 2174 IPR000008 -
Bva10g01178 2197 SMART arm_5 614 654 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1527 1567 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1776 1815 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 141 182 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 864 906 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1612 1653 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1903 1943 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1485 1525 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 358 407 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 183 223 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 780 818 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 531 570 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 572 612 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1275 1316 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 315 356 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1444 1484 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1357 1398 IPR000225 GO:0005515
Bva10g01178 2197 SMART arm_5 1230 1273 IPR000225 GO:0005515
Bva10g01178 2197 SUPERFAMILY ARM repeat 1626 2073 IPR016024 -
Bva10g01178 2197 Pfam Armadillo/beta-catenin-like repeat 151 181 IPR000225 GO:0005515
Bva10g01178 2197 Pfam Armadillo/beta-catenin-like repeat 572 611 IPR000225 GO:0005515
Bva10g01178 2197 SUPERFAMILY ARM repeat 1232 1657 IPR016024 -
Bva10g01178 2197 Gene3D - 455 693 IPR011989 -
Bva10g01178 2197 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 66 2197 - -
Bva10g01178 2197 Gene3D - 1407 1694 IPR011989 -
Bva10g01178 2197 SUPERFAMILY ARM repeat 110 693 IPR016024 -
Bva10g01178 2197 Coils Coil 344 371 - -
Bva10g01178 2197 Gene3D C2 domain 2076 2197 IPR035892 -
Bva10g01178 2197 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 583 625 IPR000225 GO:0005515
Bva10g01178 2197 Gene3D - 847 1230 IPR011989 -
Bva10g01178 2197 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 66 2197 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Bva10g01178 2197 Gene3D - 98 454 IPR011989 -
Bva10g01178 2197 Gene3D - 1698 2075 IPR011989 -
Bva10g01178 2197 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2075 2194 IPR035892 -
Bva10g01178 2197 SMART C2_3c 2077 2173 IPR000008 -
Bva10g01178 2197 Pfam C2 domain 2076 2167 IPR000008 -
Bva10g01178 2197 CDD C2 2078 2168 - -
Bva10g01178 2197 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1242 1286 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01178 Bva-Chr10 8360391 8371607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01178 543 728 U-box Gene Family AT3G46510 32.000 5.90e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01178 - - gmx:100816765 3662.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01178 10 8360391 8371607 Bva10g01178 10 8360391 8371607 ECH