Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01165 ATGAATTCTCCATCGACGCATTTTGTTTCCTCTAGAAGGATGAGTTTATATGATCCTATTCACCAGATTAATACGTGGGGAGAAAACTTCAAGACAAATGGCAGCTTAAATCCATCTTTGCCCTTAATTGATGAGGAAGACGTGAGGTTAGATAGTCAGTCAGAGGATGCTTCTAACGGAACATTGGGAACATCTAAGAAGTATGACCAAGAAGCTAATAAACCTGTTGAGAAGATACAAAGACGTCTTGCACAAAATCGGGAGGCTGCTCGTAAGAGCCGTCTACGGAAAAAGGCCTATGTTCAGCAGTTGGAATCAAGTCGTCTGAAGCTGATGCAGTTAGAGCAAGAGCTTGAACGTGCAAGACAACAGGGATTATATATGGGTGGTGGACTAGATTCGAATCAGCTGGGTTATGCTGGATCTGTAAATTCAGGTATCACTACCTTTGAGATGGAGTATGGAAACTGGGTAGAAGAGCAGAATAGACAGATCATTGAAATGAGAACTGCTTTAAGTTCACATATTGGTGATATAGAGCTCAGGATACTTGTAGATGGTATCATGAGCCACTACTTTGAACTCTATGGCATGAAATCCGCAGCTGCAAAAGCAGATGTTTTCTATGTTATGTCTGGTTTATGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGGTTTCGCCCTTCAGAGCTTCTAAAGGTTCTTGTCCCGCTGATTGAACCCTTGACAGAGCAACAACGAATGGATGTCCAAAATCTTGGACAATCTTGTCAGCAGGCAGAAGATGCTCTTTCACAAGGTATGGACAAACTCCAGCAAACACTTGCTGAAACGGTAGCAGCTGGAATTTATATGCCACAGATGGCCACGGCTATGGAGAAGTTGGAAGCCTTGGTGAGCTTTGTAAACCAGGCTGACCATCTTCGGCAAGAAACCTTGCTGCAAATGTCTCGAATCCTTACAACCCGTCAAGCAGCTCGTTACCTACTTGCTTTGGGGGAATATTTCCAGCGCCTAAGGGCTCTCAGCTCACTTTGGGCTAATCGTCCTCGTGAACCTGCTTA 1073 0.4399 MNSPSTHFVSSRRMSLYDPIHQINTWGENFKTNGSLNPSLPLIDEEDVRLDSQSEDASNGTLGTSKKYDQEANKPVEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGLYMGGGLDSNQLGYAGSVNSGITTFEMEYGNWVEEQNRQIIEMRTALSSHIGDIELRILVDGIMSHYFELYGMKSAAAKADVFYVMSGLWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVQNLGQSCQQAEDALSQGMDKLQQTLAETVAAGIYMPQMATAMEKLEALVSFVNQADHLRQETLLQMSRILTTRQAARYLLALGEYFQRLRALSSLWANRPREPA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01165 357 Coils Coil 97 124 - -
Bva10g01165 357 Pfam bZIP transcription factor 78 112 IPR004827 GO:0003700|GO:0006355
Bva10g01165 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Bva10g01165 357 PANTHER TRANSCRIPTION FACTOR TGA9 1 356 - -
Bva10g01165 357 CDD bZIP_HBP1b-like 78 130 - -
Bva10g01165 357 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Bva10g01165 357 PANTHER TRANSCRIPTION FACTOR TGA1 1 356 - -
Bva10g01165 357 Gene3D - 76 126 - -
Bva10g01165 357 Pfam Seed dormancy control 166 239 IPR025422 GO:0006351|GO:0043565
Bva10g01165 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Bva10g01165 357 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Bva10g01165 357 MobiDBLite consensus disorder prediction 49 75 - -
Bva10g01165 357 MobiDBLite consensus disorder prediction 54 68 - -
Bva10g01165 357 ProSiteProfiles DOG1 domain profile. 147 352 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01165 Bva-Chr10 8290343 8296197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01165 1 356 Calmodulin-binding Proteins AT5G65210 68.120 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva10g01165 DOG1 5.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01165 K14431 - gmx:100793353 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01165 10 8290343 8296197 Bva10g01165 10 8290343 8296197 ECH
Bva05g01649 05 13356339 13361629 Bva10g01165 10 8290343 8296197 ECH