Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01160 ATGAATCCTGTACCCAATTTCTCTCTTGcggttttttctctttttctcctttctttacTATTTTCAGCTTCAGCCTCAGAGTCTGAACTCCGATCTTTGCTCGAATTCAAGAAAGGGATTCAAAGGGATCCGCTTGGCAAAGTTTCGGAATCATGGGTAGAGTCCTCACTCGCGGACTGGAACGACTGTCCTGGCACTTGGACTGGGGTCTTTTGCGACGAAGGTGCTGGCAATATCACAGCCATAGTTCTGGATAATCTCCATTTGGGAGGGGAGCTGAAGTTGCACACCCTGCTTGGACTCACCATGCTGAAGAATCTCAGTCTCTCTGGAAATGAGTTCACTGGCCGGCTACCACCCTCATTGGGGTCATTGACCACTTTGCAGTATTTGGATCTTTCCAACAACAACTTCTATGGCCCGATCCCTGCTCGGATCAATGACCTATGGGGATTGAATTACCTGAATTTGTCCGTGAATAGATTCAAGGGTGGGTTTCCGAGTGGGTTAAATAATCTTCAGCAGCTCAGAGTGCTGGATTTGCATTCCAATGAACTTTGGGGTGATATTGGTGATGTTTTGTCGACATTGCGGAATGTCGACCATGTTGATTTGAGCTATAATAAGTTCTTTGGGGCACTTTCACTGACTACGGAGAATGTTTCGGGCTTGGCGAATACGGTGCATTTTCTGAATTTGAGTCATAACAGTTTAAACGGTGCGTTCTTTAAGGCTGATTCAATTGCATTGTTTCGCAACTTGGAAGTTTTGGACTTGGGTAATAATCAGATCAGCGGGCAGCTTCCTTCATTTGGGTCATTGCCAAATCTTCGAGTTTTGAGACTTGGGCATAATCTATTATTTGGGTCAATACCAGAGGAGTTGTTAGAAAGCTCTATGCCATTAGAAGAATTGGATCTCAGCGGCAATGGGTTTACAGGCTCAATCCTCATAATCAACTCTACaactttgaatattttgaatcTTTCATCAAATGGATTATCAGGCTCTTTGCCAACATCTTGGAGAAGATGTACAGTTGTGGACTTGAGCAACAATATGTTATCTGGTGACATTTCTGTTCTGCAGAACTGGGAAGCTACAATGGAGGTCCTTGATCTGAGTTCAAATAGGCTGTCAGGAAACTTTCCAAATTTGACAAACCAGGTTGAGAGATTAACTACACTTTCTTTGAGGAATAATTCTTTAGATGGATCCTTGCCTCCTTTATTGGGGACCTATCCTAAATTGACTACAGTTGACTTCAGTTTAAATAAACTTCATGGGTCCATTCCTGGTAGTTTATTTTCCTCAGCAACATTGGCAAGTCTGAATCTTTCTAGAAATCAACTTACAGGGCCAATTCCTCTTCAACGATCAGGAGCAAGTGAATTGCTACTTATGCCTCCTTATTGGCCAATGCAATATCTTGATTTGTCTAGTAACTCCTTGGAAGGTGTCTTGCCTTCCGATGTGGGTAGGATGGGTGGGCTCAAACTGCTGAATCTGGCAAGGAATGGCTTTTCAGGACCGCTGCCAAATGAATTGAccaaacttattaatttggaGTTCCTTGATTTGTCTAGCAACAAATTTACAGGAAAAATCCCTGATCAGCTATCTTCCAGTTTAAGTGTATTTAATGTGTCCAATAATGATCTATCTGGCCATGTTCCAGAAAATTTGAGGAGGTTTCCCCACTCTTCCTTCAGTCCTGGAAATGAATTGTTAGCCTTACCAGATAATTTACCTGGAACTAGGCCAGTGCCTGATAATATTCCTTACCAAGCGAAACATCGTAGTTCAAGGGGTAATATCAGGATAGCAATTATTCTTGCATCAGTTGGTGCTGCCGTGatgattgtttttgttttattggctTATCATCGGGCACAACTTAGAGAATTTCATGGAAGAAGTGAGATTAATGGTCGAAGCACCGGAAGAGATGTCAAGTTAGGGCGACTTACACGGCCCTCCCTTTTCAAGTTCCATACTAATGTTCAGCACCAACCAACATCATTGAGTTTTTCAAACGATCACTTGCTGACTTCCAATTCAAGGACATTATCTGGACAGTCAGAGTTTATAACTGAAATTGCTGAGCATGGCTTACCTCAGGGAGCTGTAGCAACTAGTTCAGTGTCTATAAATCCCAATGTATTGGATAATCCTCCCTCATCATCTGGAAGGAAGTCATCTCCTGGTTCTCCATTATCTTCTTCACCCCGTTTTATAGAGGCTTGTGAAAGGCCAGTGATGTTGGATGTGTACTCACCAGATCAGTTGGCTGGAGAACTGTTCTTCTTAGATTCTTCCCTTGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCAGAAGTTCTTGGCAGAAGTAGCCATGGAACTCTATACAAAGCCACTTTAGATAATGGTCATATGTTAACTGTAAAATGGTTACGGGTGGGATTGGTCAAACATAAGAAGGAATTAGCTAGAGAAGTTAAGCGGATTGGTTCTATGAGGCATCCAAACATTGTCCCACTACGGGCATACTACTGGGGGCCTAGGGAACAGGAGAGGCTTCTTTTAGCTGACTATATACATGGGGATAGCTTAGCCCTCCATCTTTATGAGACCACACCCCGGAGGTACTCCCCATTATCATTTAGCCAGAGATTAAAAGTGGCTGTTGAGGTTGCTCGATGTCTTCTTTATCTTCATGATCGAGGGCTTCCCCATGGAAACTTAAAACCCACAAATATTCTATTAGCAGGTCCTGATTATAATGCACGCCTTACTGACTATGGTCTGCACCGCCTCATGACACCTGCCGGAATTGCAGAGCAGATACTAAATCTAGGAGCACTTGGATACCGTGCTCCAGAAGTTGCTGCCTCAACCAAACCAGTTCCATCTTTTAAGGCAGATGTGTATGCACTTGGAGTGATCCTAATGGAATTGTTAACCAGAAAAAGTGCTGGTGACATAATATCAGGACAATCTGGGGCTGTTGATCTTACAGACTGGGTTAGGCTGTGCGAGCAAGAAGGACGTGTAATGGACTGTATTGACAGGGACATAGCAGGTGGGGAAGAATCCTCAAAAGAGATGGAGGAATTGCTTGCTATATCTCTCAAGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTCTCTTCAATatctatttg 3191 0.4215 MNPVPNFSLAVFSLFLLSLLFSASASESELRSLLEFKKGIQRDPLGKVSESWVESSLADWNDCPGTWTGVFCDEGAGNITAIVLDNLHLGGELKLHTLLGLTMLKNLSLSGNEFTGRLPPSLGSLTTLQYLDLSNNNFYGPIPARINDLWGLNYLNLSVNRFKGGFPSGLNNLQQLRVLDLHSNELWGDIGDVLSTLRNVDHVDLSYNKFFGALSLTTENVSGLANTVHFLNLSHNSLNGAFFKADSIALFRNLEVLDLGNNQISGQLPSFGSLPNLRVLRLGHNLLFGSIPEELLESSMPLEELDLSGNGFTGSILIINSTTLNILNLSSNGLSGSLPTSWRRCTVVDLSNNMLSGDISVLQNWEATMEVLDLSSNRLSGNFPNLTNQVERLTTLSLRNNSLDGSLPPLLGTYPKLTTVDFSLNKLHGSIPGSLFSSATLASLNLSRNQLTGPIPLQRSGASELLLMPPYWPMQYLDLSSNSLEGVLPSDVGRMGGLKLLNLARNGFSGPLPNELTKLINLEFLDLSSNKFTGKIPDQLSSSLSVFNVSNNDLSGHVPENLRRFPHSSFSPGNELLALPDNLPGTRPVPDNIPYQAKHRSSRGNIRIAIILASVGAAVMIVFVLLAYHRAQLREFHGRSEINGRSTGRDVKLGRLTRPSLFKFHTNVQHQPTSLSFSNDHLLTSNSRTLSGQSEFITEIAEHGLPQGAVATSSVSINPNVLDNPPSSSGRKSSPGSPLSSSPRFIEACERPVMLDVYSPDQLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDNGHMLTVKWLRVGLVKHKKELAREVKRIGSMRHPNIVPLRAYYWGPREQERLLLADYIHGDSLALHLYETTPRRYSPLSFSQRLKVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPDYNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPEVAASTKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSKEMEELLAISLKCILPVNERPNIRQVFDDLSSISI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01160 1063 Gene3D Transferase(Phosphotransferase) domain 1 862 1063 - -
Bva10g01160 1063 SUPERFAMILY RNI-like 106 554 - -
Bva10g01160 1063 ProSiteProfiles Protein kinase domain profile. 783 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01160 1063 SUPERFAMILY Protein kinase-like (PK-like) 786 1058 IPR011009 -
Bva10g01160 1063 Gene3D Ribonuclease Inhibitor 222 584 IPR032675 -
Bva10g01160 1063 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Bva10g01160 1063 PANTHER OS07G0626500 PROTEIN 12 1059 - -
Bva10g01160 1063 PANTHER OS07G0626500 PROTEIN 12 1059 - -
Bva10g01160 1063 Gene3D Phosphorylase Kinase; domain 1 762 860 - -
Bva10g01160 1063 SMART LRR_typ_2 251 273 IPR003591 -
Bva10g01160 1063 SMART LRR_typ_2 173 197 IPR003591 -
Bva10g01160 1063 SMART LRR_typ_2 519 543 IPR003591 -
Bva10g01160 1063 SMART LRR_typ_2 274 298 IPR003591 -
Bva10g01160 1063 SMART LRR_typ_2 101 125 IPR003591 -
Bva10g01160 1063 SMART LRR_typ_2 390 414 IPR003591 -
Bva10g01160 1063 MobiDBLite consensus disorder prediction 716 743 - -
Bva10g01160 1063 Pfam Protein kinase domain 787 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01160 1063 Pfam Leucine Rich repeats (2 copies) 253 292 IPR025875 -
Bva10g01160 1063 MobiDBLite consensus disorder prediction 716 741 - -
Bva10g01160 1063 Gene3D Ribonuclease Inhibitor 150 221 IPR032675 -
Bva10g01160 1063 Gene3D Ribonuclease Inhibitor 28 149 IPR032675 -
Bva10g01160 1063 Pfam Leucine Rich repeat 299 316 IPR001611 GO:0005515
Bva10g01160 1063 Pfam Leucine rich repeat N-terminal domain 27 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01160 Bva-Chr10 8266995 8272281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01160 474 589 Receptor kinase-like Gene Family AT5G46330 34.746 5.38e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva10g01160 Pkinase 4.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01160 - - gmx:100802768 1531.54