Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01141 ATGGACTTGACTGCAAAGCTTTATCACCTCGAGCTTAGCTCGAGCTTTCTCACCGGTACAGTCATTTTGGATGCAAGGAAAGCCGCTGTGCGACCGCACGTTCGGCCAGTTTCTAATCGAATAGTTTCTCAAAGCATTAGAGTTCGTTTATCCGCTGTTGCTGTTGAGACATCGTTGGCTCAAACAACAGACGAGGAGGATGTCGAGTCTTTGTTTTCGGATGCTTCGGCGGATGGATTTGATAAAAAACGTGTAAATAAGCGATCAAGTACCGGTGCTTCGAGTATTTCATCCGGTGTCAAGCTAGAAAATGTGAGTAAAAGCTACAAGGGTGTCACCGTGTTGAAACATGTAAGTTGGGAAGTGAAAAAGGGAGAGAAAGTGGGGCTGGTTGGTGTAAATGGTGCAGGGAAGACGACCCAGATGAGGATTATTGCTGGTCAAGAAGAGCCAGATTCCGGGAATGTGATTAAGGCAAAACCAAATATGAAAATCGCGTTTTTGAATCAAGAGTTTGAGGTATCTCTTAGTAGGACGGTGAAGGAGGAATTTATGAGTGCTTTTAAAGAGGAAATGGAGATAGCAGGGAAGTTGGAGAAGGTGCAGAAGGCACTCGAGGGGGCAGTAAACGATTTGGATTTGATGGGAAGGCTTCTAGACGAGTTTGATTTGCTTCAGAGGCGGGCCCAGGCAGTGAACTTGGATGTAGTTGATGCAAAGATTAGCAAATTGATGCCAGAACTTGGGTTTGCTGCAGAGGACTCGGACAGGTTGGTGGCCTCTTTTAGTGGTGGGTGGCAGATGAGGATGTCTCTTGGGAAGATTTTACTTCAGGAACCAGATTTATTACTGTTGGATGAACCCACAAATCACCTTGACCTTGACACTATAGAGTGGCTTGAAAACTATCTCAGCAAGCAAGATGTGCCGATGGTTATCATTTCCCATGATAGAGCAATTCTTGATCAGCTTTGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTCGAGGGAAACTATTCGCAGTATGTACTTTCAAAGGCAGCATGGATTGAAGCACAATATGCTGCATGGGAGAAGCAGCAGAAAGAGATTGAACAGACAAAAGACTTAATAAACCGGTTAGGTGCTGGGGTAAATTCTGGCCGTGCTTCTTCTGCTGAGAagAAGCTGGAGAAACTTCAGGAAGACGAATTGGTGGAGAAACCATTTCAAAGGAAACAGATGAAAATCAGGTTTCCTGAGCGTGGAAGAAGTGGAAGATCAGTAGTATCAATTAAGAACTTGGAGTTTGGCTTTGAGGATAAGGTACTCTTCAACAAGGCAAATCTTACAATtgaaaggggagaaaaaatTGCCATAATTGGTCCAAATGGGTGTGGCAAGAGTACTTTGCTGAAACTGATAATGGGTTTAGAGAAGCCAAGAGGGGGTGAAGTTGTGCTTGGCGAGCACAATGTATTACCAAACTATTTTGAGCAAAATCAGgCCGAGGCACTTGATCTGGAGAAGACAGTGCTTGAGACAGTTGAAGAAGCTGCAGAGGACTGGAGGATTGATGATATTAAAGGACTACTTGGGCGTTGTAATTTCAAGTCTGATATGCTTGACCGAAAAGTGTCCCTTTTAAGTGGTGGTGAGAAGGCACGCCTGGCCTTTTGCAAATTTATGGTGAAACCATCAACTCTGCTTGTTTTGGATGAACCAACGAATCACTTGGATATACCTTCCAAAGAAATGCTCGAGGAGGCAATAACTGAGTACACAGGCACTGTCATCACGGTGTCTCATGATCGATACTTTATAAGGCAGATAGTTAATAGAGTGATAGAAGTGAAAGATGGCACTATACAGGATTATGCAGGTGACTACAATTATTATTTGGAGAAGAATCTTGATGCTAGGGAGAGAGAGCTTGAACGCGAGGCAGAGCTGGAGGAGAAAGCTCCCAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCtaggaagaaacaaaagatgcAGGCCTTCCAGGCATCAAAACAAAAGTCTAAAGGTTCGAAAAATGCAAAGAGATGGAATTA 2084 0.4299 MDLTAKLYHLELSSSFLTGTVILDARKAAVRPHVRPVSNRIVSQSIRVRLSAVAVETSLAQTTDEEDVESLFSDASADGFDKKRVNKRSSTGASSISSGVKLENVSKSYKGVTVLKHVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLNQEFEVSLSRTVKEEFMSAFKEEMEIAGKLEKVQKALEGAVNDLDLMGRLLDEFDLLQRRAQAVNLDVVDAKISKLMPELGFAAEDSDRLVASFSGGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLENYLSKQDVPMVIISHDRAILDQLCTKIVETDMGVSRTFEGNYSQYVLSKAAWIEAQYAAWEKQQKEIEQTKDLINRLGAGVNSGRASSAEKKLEKLQEDELVEKPFQRKQMKIRFPERGRSGRSVVSIKNLEFGFEDKVLFNKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPRGGEVVLGEHNVLPNYFEQNQAEALDLEKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAITEYTGTVITVSHDRYFIRQIVNRVIEVKDGTIQDYAGDYNYYLEKNLDARERELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQASKQKSKGSKNAKRWN 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01141 694 MobiDBLite consensus disorder prediction 642 694 - -
Bva10g01141 694 SMART AAA_5 124 339 IPR003593 -
Bva10g01141 694 SMART AAA_5 451 619 IPR003593 -
Bva10g01141 694 CDD ABCF_EF-3 100 330 - -
Bva10g01141 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 632 IPR027417 -
Bva10g01141 694 MobiDBLite consensus disorder prediction 642 674 - -
Bva10g01141 694 Pfam ABC transporter 115 290 IPR003439 GO:0005524
Bva10g01141 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 100 358 IPR003439 GO:0005524
Bva10g01141 694 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 1 684 - -
Bva10g01141 694 Coils Coil 631 652 - -
Bva10g01141 694 ProSitePatterns ABC transporters family signature. 262 276 IPR017871 GO:0005524
Bva10g01141 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 351 IPR027417 -
Bva10g01141 694 Pfam ABC transporter 329 416 IPR032781 -
Bva10g01141 694 Gene3D - 96 380 IPR027417 -
Bva10g01141 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 427 642 IPR003439 GO:0005524
Bva10g01141 694 Pfam ABC transporter 443 574 IPR003439 GO:0005524
Bva10g01141 694 ProSitePatterns ABC transporters family signature. 546 560 IPR017871 GO:0005524
Bva10g01141 694 Gene3D - 389 658 IPR027417 -
Bva10g01141 694 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 684 - -
Bva10g01141 694 Coils Coil 654 674 - -
Bva10g01141 694 CDD ABCF_EF-3 427 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01141 Bva-Chr10 8173974 8178587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01141 424 644 Calmodulin-binding Proteins AT2G36910 25.911 2.30e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01141 - - adu:107470294 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01141 10 8173974 8178587 Bva10g01141 10 8173974 8178587 ECH