Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01129 ATGTCTCAAGCTATGGTGAACCATGGCTTGTTCGAGGGGCAGGATCAGGTGCCTACTGTGCAGACGGGCTTCTTTCCTTTCCCAGGAAACCTGAGCTTCCCTTCTTTGGGTTGCCATCAGTCTCTGAAAACCTTAAGTGCCATAGCTCCTTCACTGCTTGCATCTGAAGCAGCTTCCAATACTGCAAATCTAACGGAAACCCTACTCGCATCTGTTGCTCATAAGCCAAGAGAAGACCTCAACTCTACTTTGGGAGGAATCCCACTCCTTTCCCTTCAAAGATCGAGTTTAAATCCATGgGCATGGGGAGAAGTAAGTGATTGTTTGAGCAATAGAAGTACTGGAGGAGATCATGAGCATCATCTAGGGGTTTCTGccatgaagatgaagagaatcAAGGGAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAAACGATGAGCGATGTGGATGTGTTAGATGATGGCTACAAGTGGAGGAAGTACGGGCAGAAAGTGGTAAAGAACACGCAGCACCCCAGAAGCTATTACCGTTGCACACAAGATAACTGTCGTGTAAAGAAACGCGTAGAACGTTTAGCAGAGGATCCGAGGATGGTGATAACCACATATGAAGGAAGACACGCACACTCCCCATCAAATGATCTCGAGGACTCACAAAATCCATCTCAGATTAACAACTTCTTGTGGTA 695 0.4547 MSQAMVNHGLFEGQDQVPTVQTGFFPFPGNLSFPSLGCHQSLKTLSAIAPSLLASEAASNTANLTETLLASVAHKPREDLNSTLGGIPLLSLQRSSLNPWAWGEVSDCLSNRSTGGDHEHHLGVSAMKMKRIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQNPSQINNFLW 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01129 231 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g01129 231 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 221 IPR044810 GO:0003700
Bva10g01129 231 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g01129 231 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 50 221 - -
Bva10g01129 231 SUPERFAMILY WRKY DNA-binding domain 146 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g01129 231 Pfam WRKY DNA -binding domain 155 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g01129 231 Gene3D WRKY domain 138 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01129 Bva-Chr10 8104721 8107278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01129 39 231 WRKY Transcription Factor Family AT4G39410 48.594 2.35e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva10g01129 WRKY 6.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01129 - - pvu:PHAVU_002G266400g 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01129 10 8104721 8107278 Bva10g01129 10 8104721 8107278 ECH