Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01124 ATGGGATGCGGTAATTCCTCCTTGTACTCAGAGTCATCCCCTCGCAGAAACTTTGAGAGGTTGAAACTAGAAAATGGGTATGCCAAGAGAAATAGTGGAGGCAGCAAACCAATCAGCCACAAGAATGGTCATAAATTATTGAGCAGTAGTAGTTCAGTGAATGCTAATGGTGGTGTAGTAGCGAGAGGAggagaagtagaagaaaaaaaagatgaggATGGGAATATTTCAAAGAGGTTTGTGGAGAAGAAGATTGGAAGAGATGAATTTGTGGACGGATGGCCAAAGTGGCTGGTTGATAACATCCCTTTAGAGGGTTTGGATGGTCTGCATCCCAAGAGCGCTGATTCCTATGAAAAACTCGCCAAGGTAGGACGTGGAACTTACAGTAATGTGTACAAAGCTCGAGATAAGGAGAGTGGGAAAATTGTTGCTTTGAAGAAGGTACGGTTTGATACATCAGATTCAGAAAGCATCAAGTTCATGGCAAGAGAGATCACGATTCTGCGGAAGCTGGATCATCCCAATGTCATCAAGCTCGAAGGACTAGCAACATCAAGGATGCAGTATAGTCTTTATCTCGTTTTTGATTTCATGCACTCCGACCTAACCAGAATTATCACCCGCCCCGGCGAGACACTCACTGAACCACAGATTAAGTGCTATATGCAGCAGCTGCTTGCTGGCCTCCAGCACTGCCATGAGAAGGGAGTTATGCACCGTGATATTAAACCTTCTAACTTGTTTGTAGACAAACGTGGAGTGCTGAAAATTGgagattttggtctttcaatTTCTAATGTCCATAAACCCAAAGGGCCTTTCACAAATCGAGTTGTGACACTCTGGTATAGAGCTCCTGAACTGCTTTTAGGTTCAACAGATTATGGATTTGGCATTGATCTCTGGAGTGCAGGATGCATATTGGCTGAGATGTTTTTTGGTAGGCCAATCATGCGTGGGAGGACAGAGGTTGAACAGCTTCACATGATCTTCAAGCTTTTTGGTTCTCCATCGGAGGATTACtggaaaaatttgaatttaatgacaAGCTACCGTCCACCGCAATATTACAAACCTAATTATGAAGAAGTTTTCAGTGATTTTCCTTCCTCTTCCCTTGCTCTCCTCGCCACACTTCTTGATCTCCACCCTGCCCGTCGTGGCAGTGCTGCGTCTGCTCTCCAAAGTGAATTCTTCAAAACTCCTCCATTACCATGCGCCCCTAGTGCGTTACCAGTAATCTCCAAAGATGAAGATGAGCAGTCACGATCCAGAAAACGCAGAAGGCCTAAGATGACAAAAAAAGacccaaaatttcaaacaagtCGTGTGAGTAATGGGCAGAGTAGAACTGCTGAAAAACTCAAAGGAGATTCTGAATTCTCCAAGGAAGAGAAGAGTATGGAACCTAACATGCTTAGCCAAGAAATGGGAAATGGTGCAAGCAGCACATCATCGGGCTCAAAACTATTTATGAACGACGGGAATACGAAGGCACCCCTTTCTCCAGTTTTTGTGTCTGGTCCCAGAACAGAGGGTCATCCTAATGCTCTTaagaacataaagaaatatGCCCTCTTACAAGCCACTATAATAGATATGATCAATCCTAAGGAAGGCAATGAATTTGCTCAAGTTCGCAGGTCCTTTTCTGCACTGGATTTTCGTCTTGATCCAGACAAGTTACCAAATTTCTATGGAATGGATGAACAATTGGACTATCAAATTTG 1733 0.416 MGCGNSSLYSESSPRRNFERLKLENGYAKRNSGGSKPISHKNGHKLLSSSSSVNANGGVVARGGEVEEKKDEDGNISKRFVEKKIGRDEFVDGWPKWLVDNIPLEGLDGLHPKSADSYEKLAKVGRGTYSNVYKARDKESGKIVALKKVRFDTSDSESIKFMAREITILRKLDHPNVIKLEGLATSRMQYSLYLVFDFMHSDLTRIITRPGETLTEPQIKCYMQQLLAGLQHCHEKGVMHRDIKPSNLFVDKRGVLKIGDFGLSISNVHKPKGPFTNRVVTLWYRAPELLLGSTDYGFGIDLWSAGCILAEMFFGRPIMRGRTEVEQLHMIFKLFGSPSEDYWKNLNLMTSYRPPQYYKPNYEEVFSDFPSSSLALLATLLDLHPARRGSAASALQSEFFKTPPLPCAPSALPVISKDEDEQSRSRKRRRPKMTKKDPKFQTSRVSNGQSRTAEKLKGDSEFSKEEKSMEPNMLSQEMGNGASSTSSGSKLFMNDGNTKAPLSPVFVSGPRTEGHPNALKNIKKYALLQATIIDMINPKEGNEFAQVRRSFSALDFRLDPDKLPNFYGMDEQLDYQI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01124 577 Gene3D Phosphorylase Kinase; domain 1 108 200 - -
Bva10g01124 577 PANTHER CYCLIN-DEPENDENT KINASE 70 508 - -
Bva10g01124 577 SMART serkin_6 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01124 577 MobiDBLite consensus disorder prediction 454 471 - -
Bva10g01124 577 MobiDBLite consensus disorder prediction 35 57 - -
Bva10g01124 577 ProSiteProfiles Protein kinase domain profile. 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01124 577 MobiDBLite consensus disorder prediction 1 73 - -
Bva10g01124 577 MobiDBLite consensus disorder prediction 473 488 - -
Bva10g01124 577 Gene3D Transferase(Phosphotransferase) domain 1 201 440 - -
Bva10g01124 577 MobiDBLite consensus disorder prediction 410 488 - -
Bva10g01124 577 SUPERFAMILY Protein kinase-like (PK-like) 113 407 IPR011009 -
Bva10g01124 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Bva10g01124 577 PANTHER CELL DIVISION PROTEIN KINASE 70 508 - -
Bva10g01124 577 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Bva10g01124 577 Pfam Protein kinase domain 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01124 Bva-Chr10 8064518 8069627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01124 113 453 Core Cell Cycle Gene Families AT5G10270 44.324 9.29e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva10g01124 Pkinase 4.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01124 K08819 - gmx:100782603 657.907