Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01119 ATGTGTTTGTTAAAGGTGGCGAATTCAAATCCCAGAAGAAAGGCAAACAGAGAAATCAATGAAAACACAAACAATCCCACACCCACATGGTCAATGGCAATGATATTCCCAGGATTGAACAGGGAAACAGAGATGTCTGCTATGGTCTCTGCTCTGACACATGTTGTCTCCGGAGATGTCCCAGATGATCATAACCTTGTTTTTCAGCATCATCAACAGGGTGCCATTGAAGAAGCTCATGCTCCACCAATGGCTTCTCTTTCTGCAactccatcttcttcttcatcttatATTGGCACTTCTGCTCTCAAGAGAAGTAGACAAGATGGGACTTCTGGTATTTCAACGAACACAGTTGAGCAGGATTCGAGAAATTGGAGCAGCAGAACAAGAATAGGAAATTATGTGTATGAATACAGTGGAGAGAATGCGAGGGAGAGGGAGCAAGCGGAGCAGGGGCAGCCGAGGAGGAAATACAGAGGAGTGAGACAGAGGCCATGGGGGAAATGGGCGGCGGAAATCAGAGACCCATTCAAGGCGGCGAGAGTTTGGTTAGGAACATTTGACACGGCGGAATCAGCCGCCAGAGCATACGACGAAGCTGCACTGCGTTTTAGAGGCAACAAAGCAAAACTGAATTTCCCCGAAAACGTTAGACTCCGGCAACAGCAGCATCCCTTTCCCGTCATCTATGCTGCTCCGGCCAACCAACTGAGCATTTCAAATTCTCCGGCCACTTCAGTTGTCTCCATTCCAACGTCCACCGAGCCAATTGTCCACACAGAAGCATCCCTTCAACAATCACAAAATCCCCAGCCTTCGAGCTATCTTTACAACTATTCTCAGTTTGATGACTTTCCAATGAATCTGTACGATGATCAGATGATTCTGTCGACTACTAGTAGCTCTTCACTTTATTCTGGGCAGTTTACGGAGACAAGTAGTGGCTCACATTATGTACCATCATCGTCGGCATCGGTGTCAGCATGGTCGGCTTCCGGTCAGACATCCTCTTCCTCTAGATA 1025 0.4634 MCLLKVANSNPRRKANREINENTNNPTPTWSMAMIFPGLNRETEMSAMVSALTHVVSGDVPDDHNLVFQHHQQGAIEEAHAPPMASLSATPSSSSSYIGTSALKRSRQDGTSGISTNTVEQDSRNWSSRTRIGNYVYEYSGENAREREQAEQGQPRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAESAARAYDEAALRFRGNKAKLNFPENVRLRQQQHPFPVIYAAPANQLSISNSPATSVVSIPTSTEPIVHTEASLQQSQNPQPSSYLYNYSQFDDFPMNLYDDQMILSTTSSSSLYSGQFTETSSGSHYVPSSSASVSAWSASGQTSSSSR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01119 341 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 40 338 - -
Bva10g01119 341 SMART rav1_2 158 221 IPR001471 GO:0003700|GO:0006355
Bva10g01119 341 MobiDBLite consensus disorder prediction 7 27 - -
Bva10g01119 341 MobiDBLite consensus disorder prediction 82 122 - -
Bva10g01119 341 SUPERFAMILY DNA-binding domain 158 216 IPR016177 GO:0003677
Bva10g01119 341 Pfam AP2 domain 158 207 IPR001471 GO:0003700|GO:0006355
Bva10g01119 341 CDD AP2 158 217 IPR001471 GO:0003700|GO:0006355
Bva10g01119 341 PRINTS Ethylene responsive element binding protein signature 181 197 IPR001471 GO:0003700|GO:0006355
Bva10g01119 341 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Bva10g01119 341 Gene3D AP2/ERF domain 157 217 IPR036955 GO:0003700|GO:0006355
Bva10g01119 341 ProSiteProfiles AP2/ERF domain profile. 158 215 IPR001471 GO:0003700|GO:0006355
Bva10g01119 341 MobiDBLite consensus disorder prediction 312 341 - -
Bva10g01119 341 MobiDBLite consensus disorder prediction 86 122 - -
Bva10g01119 341 PANTHER DNA-BINDING DOMAIN 40 338 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01119 Bva-Chr10 8040342 8041830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01119 1 220 AP2-EREBP Transcription Factor Family AT5G64750 43.774 7.94e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva10g01119 AP2 2.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01119 - - lang:109338199 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01119 10 8040342 8041830 Bva10g01119 10 8040342 8041830 ECH
Bva05g00103 05 522496 523054 Bva10g01119 10 8040342 8041830 ECH