Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01103 ATGCTGGAAATCATAAGATTACCGGAAAATCCTGAGGCTTCTTCCATCGAAACCCGGCGAATAGAGGAGGAAGAGGTAGTGAGAGATGGAGTTGCCAGCGAAGACGGTGATCGGAATTCCACCTCTAACCGGTGGCCTCGAGAGGAGACAATGGCTTTGCTCAAGATAAGATCTGAAATGGATGTTGCTTTCAGAGATGCAAGCACCAAAGCTCCTCTTTGGGAACAAGTTTCGAGGAGATTAGCTGAGCTAGGATATGATAGGACTGCCAAGAAATGCAAAGAGAAGTTTGAAAACATGTACAAATACCACAGAAGGACCAAGGAAGGGCGCCATGGCCGACCCAACGGCAAGAGTTATCGTTTTTTTGAACTATTAGAGGCTCTAGACACCCACCCAGTGCTTCCTCCTCCTTCCCCAGAGAAGAGTCAGGAACAAGTGGCAGCTACAGCAAAAATAACAGCCACAACGGATCTACCTGCACATGCTATTCGAGATGCAGTACCGTTTTCCATCAGACTCCCTAGTGCAAATATGTTTAACCACTCTTCTTCAACAACTTCTTCTTCCAGCAAGGAATCGGAGCAAGGTATACGAAAAGGGAAGAGGAAGCTGACAGAGTTTTTccatagattgatgaagcAAGTAATAGAGAGGCAAGAGGCCCTGCAGAACAAGTTTATGGAGGTGTTAGAAAAATGTGAACAAAATCGAATGGCGAGAGAGGAAGTTTGGAAGATGGAAGAATTAGCTCGAATCAAGAGGGAGCGCGAGCTTTTGGCTCAAGAAAGATCAATTGCTGCAGCGAAGGATGCTGCAGTGCTTGCCTTTCTGAAGAAATTCACAGAACAAGCAGGTCCGGTGCAATTGCCCGAGAAGATTCTAGTTGATAACCCAATTCCATATGATAATCATAAggacaaacaagaaaatgtaaatGGAGGCAGTGTTATAAATCAGCAAGAATGCACAAATGGGGGGAATTTCATGCAGATGAGCTCCTCAAGATGGCCTAAAGAGGAAGTGGAAACTTTAATTAGAGTTAGGACAAACCTTGATGTGCAGTATGAAGGTAATGGACCTAAAGGACCTCTCTGGGAAGAGATATCTTCCGAAATGAAGAAGATTGGCTATGACCGCAGTGCCAAGAGATGCAAAGAGAAATGGgagaatataaacaaatatttcaagaggatgaaggaaaagaataagagAAGGCCTGAAGATTCCAAGACCTGTCCTTATTTTCATCAGCTGGACGATTTATACAGTAAAAAACCCAAAAAGGTTCAGGAATCAGCTGGTTCTGGTAACGAGTTGAAACCTGAGGAGCTATTAATGCATATTATGGATGGCCAAAATGAAGGACAACAACTTGAGGCATCATCTGAGGATGCCGACAGAGATAATACGAATCAGAATGGAGGAGATAAGGAGGAAGGAGATGGGTATCATCAGATCATGGTGAATAGTCCTTGCATAGCAATCACAGGTTA 1496 0.4198 MLEIIRLPENPEASSIETRRIEEEEVVRDGVASEDGDRNSTSNRWPREETMALLKIRSEMDVAFRDASTKAPLWEQVSRRLAELGYDRTAKKCKEKFENMYKYHRRTKEGRHGRPNGKSYRFFELLEALDTHPVLPPPSPEKSQEQVAATAKITATTDLPAHAIRDAVPFSIRLPSANMFNHSSSTTSSSSKESEQGIRKGKRKLTEFFHRLMKQVIERQEALQNKFMEVLEKCEQNRMAREEVWKMEELARIKRERELLAQERSIAAAKDAAVLAFLKKFTEQAGPVQLPEKILVDNPIPYDNHKDKQENVNGGSVINQQECTNGGNFMQMSSSRWPKEEVETLIRVRTNLDVQYEGNGPKGPLWEEISSEMKKIGYDRSAKRCKEKWENINKYFKRMKEKNKRRPEDSKTCPYFHQLDDLYSKKPKKVQESAGSGNELKPEELLMHIMDGQNEGQQLEASSEDADRDNTNQNGGDKEEGDGYHQIMVNSPCIAITG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01103 498 MobiDBLite consensus disorder prediction 461 484 - -
Bva10g01103 498 PANTHER - 19 491 - -
Bva10g01103 498 ProSiteProfiles Myb-like domain profile. 329 393 IPR001005 -
Bva10g01103 498 Gene3D - 337 398 - -
Bva10g01103 498 Gene3D - 45 106 - -
Bva10g01103 498 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 19 491 - -
Bva10g01103 498 MobiDBLite consensus disorder prediction 1 46 - -
Bva10g01103 498 SMART sant 41 103 IPR001005 -
Bva10g01103 498 SMART sant 333 395 IPR001005 -
Bva10g01103 498 Pfam Myb/SANT-like DNA-binding domain 43 129 IPR044822 -
Bva10g01103 498 Pfam Myb/SANT-like DNA-binding domain 335 422 IPR044822 -
Bva10g01103 498 CDD GT1 335 400 - -
Bva10g01103 498 ProSiteProfiles Myb-like domain profile. 37 101 IPR001005 -
Bva10g01103 498 SUPERFAMILY Homeodomain-like 333 405 IPR009057 -
Bva10g01103 498 CDD GT1 43 108 - -
Bva10g01103 498 MobiDBLite consensus disorder prediction 181 200 - -
Bva10g01103 498 MobiDBLite consensus disorder prediction 448 484 - -
Bva10g01103 498 MobiDBLite consensus disorder prediction 13 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01103 Bva-Chr10 7935780 7937939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01103 31 428 Trihelix Transcription Factor Family AT1G76880 46.799 2.48e-122 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva10g01103 Myb_DNA-bind_4 2.7e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01103 - - qlo:115994903 569.311