Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01100 ATGGCTGCCATGAACTCTAGCGTCCTGGCTTGTAGCTACGCCATATCAGGTGCAGCATCTTCTGATCTGAATGGGAAGCTCGCGAGCATTCCTTCAGTTTCAGTTTCGGGTCACAAGTCGGCAGTGATCAAAGCTCAACAGCAAGAGACAAGAGTTGCCCAACCCAAAGAAGGAAGGAGAGCTGTACTTGCTTTATTGGCAGCAACCCTTGTGACCTCTGCAGCTGCTGCCTCCAATTGCTCCGCAAATGCTGGTGTCATAGAAGAATACCTGGAGAAGAGCAAGGCCAACAAGGAATTGAATGACAAGAAGAGGTTGGCAACAAGTGGGGCAAACTTCGCCAGAGCTTACACTGTGCAATTTGGTACTTGCAAGTTCCCTGAGAACTTTACCGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCATCACTGACGATTTGCAGCTTGAATGCGAAGGAAAGGATAAATACAAGTGTGGTTCTAATGTGTTCTGGAAATGGTG 509 0.4774 MAAMNSSVLACSYAISGAASSDLNGKLASIPSVSVSGHKSAVIKAQQQETRVAQPKEGRRAVLALLAATLVTSAAAASNCSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFITDDLQLECEGKDKYKCGSNVFWKW 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01100 169 Gene3D - 85 169 IPR044907 -
Bva10g01100 169 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 169 IPR008796 GO:0009522|GO:0015979
Bva10g01100 169 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 169 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01100 Bva-Chr10 7925757 7926744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01100 1 140 Calmodulin-binding Proteins AT5G64040 63.889 4.05e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01100 K02701 - jre:109021950 254.603