Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01092 ATGAGTTCAATGCTTCCAGAAAGCTCAGAGGAGGGCACTGGGCATGCAGAGCCTCCCGATCCCGATGTTGTTGAAATAGATCCAACTGGTCGCTACATAAAGTACAAAGAAGTGCTCGGCAAAGGTGCCTTCAAGACCGTTTGTAAGGCATTTGATGAGGTTAATGGAATTGAAGTAGCATGGAACCAGGTTCGGATTGATGAGGTACTACAGTCACCGGATGACTTAGAGAGGCTGTACTCAGAAGTGCATCTCTTGAAATCATTAAAGCACAATAATATAGTAAAGTTCTACAATTCCTGGATTGATGATAAGCACAAAACTGTTAACATGATTACTGAGTTGTTCTCCTCGGGTAGTCTCAGACAGTACCGTAAGAAACACAAGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCTAGGCAGATTTTAATGGGTTTAAACTACCTCCATAGTCATAACCCACCAATTATGCATAGGGACCTCAAGTGTGataatatattcattaatGGTAACCAAGGAGAGGTTAAAATTGGAGATCTTGGGCTGGCGACTGTCTTGGAGCGGACTAATGCCAAGAGTGTAATTGGGACCCCTGAGTTTATGGCACCTGAGCTGTATGATGAAGATTACAATGAATTGGCTGacatatattcttttgggATGTGCATGTTAGAGATGGTGACTTCTGAGTATCCTTATAGTGAATGTAGAAACTCAGCCCAGATATACAAGAAAGTTTCATCTGGTGTAAAGCCTGCTGCTCTTGCTAAGGTAAATGATCCAGAAATTAAGTCATTTATTGAGAAATGTCTAGTCCCAGCACCTCAAAGATTGTCAGCAAAGGAGCTTCTGATGGACCCTTTTCTCCAAGTGAATGGTTTCGCAAGAAATGGTCCTCTCCTTTTACCTGACATTGTTCTGCCCAAATTGGGAGCCTTTGGGGATCGTATTCTGATGTCAGAAGGTCCATCTACTGCACGTAATGGATCCATTTCTATGTCACTTGGTGACACCAGTGAGCTACCTGTGGTCACtatatttgataatgaatCGTCACGTTCTCCATGTGTGGAGATACGAAGGGTGAAGAAGggtgatattttctttctaaaaggTGAAGAAAACGATGAAAACTCTGTATCATTGGTTCTCCGGATAGCTGATCAGAATGGAAGGGCAAGAAATATCCATTTCATATTCTATCTTGACAGTGATACTGCCATCTCAGTTTCAAGGGAAATGGTGGAGCAACTTGAACTTGCCGAACAGAATGTCAAGTTCATAGCTGAGTTAATAGATTTGTTACTGATGAATATGGTTCCCAGTTGGAAACCTTGTGTACAGATTGATCATTTGGTTTCTTCAGATGGTAAACAAACACACGTGAGCCATCAGTTGGCAAAACACACAGGAAACTCCCAAAATTCCATACGAAATGTGACTCAAGTTGACGAGTTTTTATCGCATGTCAACATGGGTATCCAGAATACTACCAGGCCAGATGATTTGTGTTCTGAGATGTCATATGTCACTACAGCAACTGAGTTTAATGATAAGAGGTTTTCTGTAGCTTCATTTATGTCTGCCGACTCAGGATTTGCAGATTTCAACTTACCTAGAGTAAATATAGGGAGTGCATCTTCATGTGCATCTGAAGTTGAAGCATCACCTAATTACAGAAGCAAGGTTTCAGATGTGGGCAGCAATGTTATGGCTAGCATCTCAAATGCTATGAATCTTTCCTCCTTATCTGAGCCGGAGGATGAGTTGAGGAAAGAGTTAGAACTGATCGAACAGCAGTATCAGGATGCTATTAAAGAAATATCCAAAAGAAGAGAGGAGGCCATCATGGAGACTAGAAGGAGGCTGTCACAGAAGAAGATGCTATG 1892 0.4075 MSSMLPESSEEGTGHAEPPDPDVVEIDPTGRYIKYKEVLGKGAFKTVCKAFDEVNGIEVAWNQVRIDEVLQSPDDLERLYSEVHLLKSLKHNNIVKFYNSWIDDKHKTVNMITELFSSGSLRQYRKKHKKVDMKAVKGWARQILMGLNYLHSHNPPIMHRDLKCDNIFINGNQGEVKIGDLGLATVLERTNAKSVIGTPEFMAPELYDEDYNELADIYSFGMCMLEMVTSEYPYSECRNSAQIYKKVSSGVKPAALAKVNDPEIKSFIEKCLVPAPQRLSAKELLMDPFLQVNGFARNGPLLLPDIVLPKLGAFGDRILMSEGPSTARNGSISMSLGDTSELPVVTIFDNESSRSPCVEIRRVKKGDIFFLKGEENDENSVSLVLRIADQNGRARNIHFIFYLDSDTAISVSREMVEQLELAEQNVKFIAELIDLLLMNMVPSWKPCVQIDHLVSSDGKQTHVSHQLAKHTGNSQNSIRNVTQVDEFLSHVNMGIQNTTRPDDLCSEMSYVTTATEFNDKRFSVASFMSADSGFADFNLPRVNIGSASSCASEVEASPNYRSKVSDVGSNVMASISNAMNLSSLSEPEDELRKELELIEQQYQDAIKEISKRREEAIMETRRRLSQKKML 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01092 630 CDD STKc_WNK 31 290 - -
Bva10g01092 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 470 629 - -
Bva10g01092 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 6 481 - -
Bva10g01092 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Bva10g01092 630 Gene3D Phosphorylase Kinase; domain 1 18 114 - -
Bva10g01092 630 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01092 630 Gene3D Transferase(Phosphotransferase) domain 1 116 295 - -
Bva10g01092 630 Gene3D - 379 481 - -
Bva10g01092 630 Coils Coil 588 619 - -
Bva10g01092 630 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 381 434 IPR024678 GO:0004674|GO:0005524
Bva10g01092 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 470 629 - -
Bva10g01092 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 481 - -
Bva10g01092 630 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01092 630 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Bva10g01092 630 MobiDBLite consensus disorder prediction 1 24 - -
Bva10g01092 630 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01092 Bva-Chr10 7897644 7901165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01092 133 477 MAP Kinase Kinase Kinase AT1G49160 67.614 1.57e-174 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva10g01092 Pkinase 4.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01092 K08867 - gmx:121175054 842.802