Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01082 ATGACGACGCATTTCAGAAAACCCCTCAAATCCACCTCCCTTTTCCGATCCCCTCTATCCTTATCAATGGCTTCTATCCTCTGCGTTTCCATTCTTAccatctttctcttcctcactATCTCCTCCGCCACCCGCCACCACCACACTCCAGCCCCGCGTTCCCCCGCCCCTTCTCTCACCACCACCGTCACGCCCGAGATCCAGCAAGCCTGCAAAGCCACTCGCTTCCCTCAACagtgtcaaacttctctagCCCAATCCAATCGCGTCCCTTCCAATCCGACCCCTCTTCAACTCATCCAAGCAGCCTTGGGTGTCTCCTCTGATAACCTCAAGACCGCTCAGTCTATGGTCGAGGCCATTCTAGATGCCTCGGCAAACAGCCAGAACCGTACCGTTGCTGCAAAGAGCTGCCTCGAAGTGCTTCGTAACTCGGAGTACCGCATTTCTCTCGCCACTGACGCGCTGTCGCGAGGCAAGAACAAGGACGCCCGGGCTTGGATGAGCGCCGCCTTATTGTACCAGTACGACTGCTGGTCCGGTTTGAAGTACGCCAACGACACCCACATGGTGGGTGAAACCATGGCCTTCTTGGACTCTCTCACTGCCCTTTCCAGTAACGGCCTCGGCATCATCAGGTCCTACGATCTATTCGGGAACGACGCTGCATCCTGGACACCACCCATGACCGAGCGCGGTGGGTTCTGGGAGGGGTCCGGGTCGGGAAGCGGGTCTGGATTGGGTTTCAGTGGTGGGTTCCCGGCCAAGTTGACGGCGGATGCTACGGTGTGTAAGGAAGGAGGAAATGGCTGTTATAAGACGGTGCAGGAAGCTGTCAACGCTGCGCCCGATAACGCAGGGCCACAGAGGTTTGTGATTCGGATAAAGGAAGGGGTTTATGAGGAGACGGTTCGGGTTCCgttggagaagaaaaatctgGTCTTTTTGGGTGATGGCATGGGTAAGACGGTCATCACAGGCTCCGCGAATGTGGGCCAGCCAGGAATGACTACCTACAATTCAGCTACAGTCGCGGTTCTTGGGGATGGGTTCATGGCCAAGGATCTGACAATACAGAACACGGCAGGTCCTGATGCTCACCAAGCAGTGGCCTTCAGATCAGACAGTGATCTATCTGTGTTTGAGAACTGTGAATTCTTAGGCAATCAAGATACTCTTTATGCTCATTCACTCAGGCAGTTCTATAAATCATGTCGCATCGAGGGCAATGTGGATTTCATTTTTGGCAACTCAGCTTCTATTTTCCAAGACTGCCAGATTTTAGTGCGTCCCAGGCAATTGAGGCCTGAAAAGGGGGAGAACAATGCCATCACAGCACATGGCAGGACAGACCCTGCCCAGACAACAGGCTTTGTTTTCCAGAACTGTTTGATTAATGGCACTGAGGAATACATGAATTTGTATAACAGTAAGCCTAAAGTACACAAGAACTTCTTGGGGAGGCCCTGGAAGGAGTATTCAAGAACTGTTTTCATTCACTCTTTATTGGAAGCTCTCATCACACCACAAGGTTGGATGCCATGGACTGGTGACTTTGCACTAAAGACACTCTTCTATGGcgaatttgaaaattcaggACCTGGTTCTGATACTACTCAGAGAGTACCCTGGGGTAGCAAGATCCCAGCCGAGCATGTCTTCACATATTCAGTCCAGAATTTCATTCAAGGAGATGAATGGATACCCTCATCTCAGTTATCAGCTCATCGTCGTAAAGTTGATAATAGATTGACCAGGAGGCTCATTAAGTA 1772 0.496 MTTHFRKPLKSTSLFRSPLSLSMASILCVSILTIFLFLTISSATRHHHTPAPRSPAPSLTTTVTPEIQQACKATRFPQQCQTSLAQSNRVPSNPTPLQLIQAALGVSSDNLKTAQSMVEAILDASANSQNRTVAAKSCLEVLRNSEYRISLATDALSRGKNKDARAWMSAALLYQYDCWSGLKYANDTHMVGETMAFLDSLTALSSNGLGIIRSYDLFGNDAASWTPPMTERGGFWEGSGSGSGSGLGFSGGFPAKLTADATVCKEGGNGCYKTVQEAVNAAPDNAGPQRFVIRIKEGVYEETVRVPLEKKNLVFLGDGMGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIQNTAGPDAHQAVAFRSDSDLSVFENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNSASIFQDCQILVRPRQLRPEKGENNAITAHGRTDPAQTTGFVFQNCLINGTEEYMNLYNSKPKVHKNFLGRPWKEYSRTVFIHSLLEALITPQGWMPWTGDFALKTLFYGEFENSGPGSDTTQRVPWGSKIPAEHVFTYSVQNFIQGDEWIPSSQLSAHRRKVDNRLTRRLIK 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01082 590 CDD PMEI-like_3 70 212 - -
Bva10g01082 590 Gene3D - 254 578 IPR012334 -
Bva10g01082 590 PANTHER PECTINESTERASE 17 571 - -
Bva10g01082 590 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 213 IPR006501 GO:0004857
Bva10g01082 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 213 IPR035513 -
Bva10g01082 590 SMART PMEI_2 62 211 IPR006501 GO:0004857
Bva10g01082 590 SUPERFAMILY Pectin lyase-like 259 571 IPR011050 -
Bva10g01082 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 215 IPR035513 -
Bva10g01082 590 Pfam Pectinesterase 260 565 IPR000070 GO:0030599|GO:0042545
Bva10g01082 590 Pfam Plant invertase/pectin methylesterase inhibitor 67 210 IPR006501 GO:0004857
Bva10g01082 590 PANTHER PECTINESTERASE 17 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01082 Bva-Chr10 7839148 7842040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01082 51 567 Carbohydrate Esterase AT5G09760 66.281 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01082 - - adu:107480269 837.41