Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01074 ATGgccaaaacaaaattgattccGGGATTTCGGTTTCATCCCACTGACGTTGAGCTGGTTAAGTACCATCTAAAGAGGAAGGTGATGGGTAAGAAATTTTCTCAAGATGTGATTGCAGAAGTCGACATATATAAGTATGTTCCATGGGACCTTCCAGaTAAATCTATTCTGCAAAGTGGGGATTTGGAATGGTATTTCTTTTGCCCCAGAGGAAAGAAATACGCAAACGGGGCAAGATTGAATCGGTCAACCGAAGGTGGTTTCTGGAAAACCACTGGGAGGGATAGACATATCACTTACAACAATCAGATCGCGGGCATGATTAAAACCCTGGTATTTCACACTGGTCGACCACCGAAAGGAGACCGAACTGATTGGGTGATCCACGAATATAGACTTGAAGATAAGGATCTCACTGACAAAGGCATTCCGCAAGACTCCTACGTGCTCTGTAGGCTCTTCCAAAAGGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAAACCATTTAATGAGGAAGAATGGGACGATGATGATGAGGAAATTGGTTTTGTAGGTTCTGATCCTTTAGCTTCTCTTGCACCCTTTCCTGTGCTACCTATGGCACACAATAGTTCTACTGCAGCTAACATGCAGCTCCATGTGAGTGGATGCATTGCATCGTCATCTCTGTCATGTCTATCAGGAGCAGTGCCTTCCCCTCATTTGGTTTCAAGTGTTCCAGTTGATGATGATGTTTTGTTGCTGTTGGATTCTTTCACAACAGATAACACACCGagtttgaatgaaaataacGAAACTGAGAAGGTTAATAATCACGATCGGCAAACAGATGCTAACGGTTCACCGCATTTGGatgtaaatgatatttttaaggaCTTGGGCGACCTTGACAACTTTGCTGGATTGGGTGAAGATGAACATCATACTGGAAACCAAATGCTTCCTGTGAATAATGTGTCCTCCTTGGAATTCTCTGATCCAGATTTCTTAGAGTTGCTTGACCTAGACTCTCCGTTATTCTGGCAAGCTGAACAAAATCAATG 1049 0.4156 MAKTKLIPGFRFHPTDVELVKYHLKRKVMGKKFSQDVIAEVDIYKYVPWDLPDKSILQSGDLEWYFFCPRGKKYANGARLNRSTEGGFWKTTGRDRHITYNNQIAGMIKTLVFHTGRPPKGDRTDWVIHEYRLEDKDLTDKGIPQDSYVLCRLFQKDGPGPRNGAQYGKPFNEEEWDDDDEEIGFVGSDPLASLAPFPVLPMAHNSSTAANMQLHVSGCIASSSLSCLSGAVPSPHLVSSVPVDDDVLLLLDSFTTDNTPSLNENNETEKVNNHDRQTDANGSPHLDVNDIFKDLGDLDNFAGLGEDEHHTGNQMLPVNNVSSLEFSDPDFLELLDLDSPLFWQAEQNQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01074 349 MobiDBLite consensus disorder prediction 259 285 - -
Bva10g01074 349 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Bva10g01074 349 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Bva10g01074 349 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Bva10g01074 349 PANTHER PLANT NAC DOMAIN PROTEIN 1 249 - -
Bva10g01074 349 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 249 - -
Bva10g01074 349 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01074 Bva-Chr10 7785734 7788593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01074 1 248 NAC Transcription Factor Family AT5G64060 56.800 4.71e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva10g01074 NAM 2.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01074 - - adu:107470479 380.563