Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01069 ATGCCCGCTTGGTGGGGAAGAAAATCCAGCAAGAACAAGGAGCGGCAGCAGGAACCAAATGACGGCGCTCAATTTAATTTCGTCAAATCCCCGATTAGAAATTGTAAAACAAGTACCAAAAAAGGGAAGGACAAACCCAAGAGCTTCGATGAGGTCTCCGGCACGACCCTCTTTCGGATTTCGCCGAGGACCAGCAAGGATTTTACTGCTGTTACTGGCTCTTCGTCTTGTTTCGATTCCGATGGCGCCGATAGGAAAGGGCTTCCCTTGCCTCGACCATCCGGCTCGCCACACCATAGCTTTAGGACCGATCAAGCTATTGCCTTGGGATCTTCCTCCGTCTCTGGTTCGAGCATCAGCTCTTCTGGCTCTTATGATGATCATCCAATCTCTCAATTTAATGCTGCCAGagGACAAGCTGAGATAAAATTCAACACGAGGTCAAAAAGCCCAGGTCCTGGGTCAAGAGGGCCCACCAGTCCTACTTCACCTCTTCATCCGAGGTTCCATGTTATGAGTCTTGACTCTCCTACAGGCAAGCAAGATGATGGAAGGAGTCAATGTCATCCGTTGCCTCTTCCACCAGGTTCTCCAACGAGTCCATCTGCTCTTTCCAATGGCCGAGCAACTAGAGTTCTAGAAAACACTCCCTGTAATCTGTCAAAGtggaagaaaggaaagcttcTAGGTCGTGGAACCTTTGGTCATGTTTACCTGGGATTTAACAGTGAAAGTGGACAAATGTGTGCAATTAAAGAAGTCAGGGTTGTCTCTGATGATCAAACATCTAAAGAATGCCTCAAGCAACTTAACCAGGAGATAAATTTACTTAAGCAGCTTTCAGATCCAAACATTGTTCAATACTATGGAAGTGAACTGGGAGAAGAGACACTTTCAGTTTATTTGGAATATGTCTCGGGTGGTTCTATTCACAAGTTACTTCAGGAATATGGTGCATTTAAGGAGCCTGTTATTCAAAACTATACCAGGCAGATTGTCTCTGGACTTGCCTATTTACATGAAAGAAATACAGTGCACAGGGATATCAAAGGGGCCAACATACTAGTTGATCCTAATGGTGAAATCAAATTGGCAGACTTTGGAATGGCCAAACATATAAACTCTTCTACCTCTATGCTTTCTTTCAAGGGAAGTCCGTATTGGATGGCACCTGAgGTTGTAATGAATACGAATGGCTATAGTCTTCCGGTAGACATATGGAGCTTGGGATGTACAATTCTTGAAATGGCATCATCAAAGCCTCCATGGAGTCAGTATGAAGGgGTGGCtgcaatatttaaaattgggAACAGCAAAGATATGCCCGAAATTCCTGAGCATCTTTCCAGTGaggcaaaaaattttataaagctATGTTTACAGAGAGACCCATCAGCTCGTCCATCAGCGTCAAAATTACTTGATCATCCCTTTATCCGAGATCAATCAGCAACAAGAGCTACAAATGTCAACATAACCAGGGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACACCGCCGGCATTAGAGCTTCATTCCAATAGAACAAGCATAACTTCACTTGATGGAGACTATGCGACAAAGCCGGCTGTTGCAACTTCACGAGCATTAAGGAGTCCAAGAGAGAACACAAGAACGATCACATCCTTACCAGTATCTCCCTGTTCAAGTCCATTGCGACAGTACGGGCCGGCACACAAGAGTTGTTTCCTTTCTCCTCCTCACCCAACTTACACTATGATGGGACAAAATTCCTATACTTTGAATGACTTCTCCTCGTATCCAGTGAGATCCAATGCTACATTTACTCTTGATCCTTGGCATGAATCGTCGCCATACAAAGCCTATACACCTGGTGGATCCCCTAGAAACAGACTCATTTG 1886 0.4364 MPAWWGRKSSKNKERQQEPNDGAQFNFVKSPIRNCKTSTKKGKDKPKSFDEVSGTTLFRISPRTSKDFTAVTGSSSCFDSDGADRKGLPLPRPSGSPHHSFRTDQAIALGSSSVSGSSISSSGSYDDHPISQFNAARGQAEIKFNTRSKSPGPGSRGPTSPTSPLHPRFHVMSLDSPTGKQDDGRSQCHPLPLPPGSPTSPSALSNGRATRVLENTPCNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDQTSKECLKQLNQEINLLKQLSDPNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHERNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMASSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSSEAKNFIKLCLQRDPSARPSASKLLDHPFIRDQSATRATNVNITRDAFPYMFDGSRTPPALELHSNRTSITSLDGDYATKPAVATSRALRSPRENTRTITSLPVSPCSSPLRQYGPAHKSCFLSPPHPTYTMMGQNSYTLNDFSSYPVRSNATFTLDPWHESSPYKAYTPGGSPRNRLI 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01069 628 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 610 - -
Bva10g01069 628 MobiDBLite consensus disorder prediction 112 131 - -
Bva10g01069 628 ProSiteProfiles Protein kinase domain profile. 223 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01069 628 PANTHER MAP KINASE KINASE KINASE 1 610 - -
Bva10g01069 628 MobiDBLite consensus disorder prediction 112 129 - -
Bva10g01069 628 SMART serkin_6 223 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01069 628 CDD STKc_MEKK1_plant 222 479 - -
Bva10g01069 628 MobiDBLite consensus disorder prediction 144 206 - -
Bva10g01069 628 SUPERFAMILY Protein kinase-like (PK-like) 220 480 IPR011009 -
Bva10g01069 628 MobiDBLite consensus disorder prediction 63 101 - -
Bva10g01069 628 MobiDBLite consensus disorder prediction 63 79 - -
Bva10g01069 628 MobiDBLite consensus disorder prediction 1 51 - -
Bva10g01069 628 ProSitePatterns Protein kinases ATP-binding region signature. 229 252 IPR017441 GO:0005524
Bva10g01069 628 Gene3D Transferase(Phosphotransferase) domain 1 220 499 - -
Bva10g01069 628 MobiDBLite consensus disorder prediction 144 162 - -
Bva10g01069 628 Pfam Protein kinase domain 224 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01069 Bva-Chr10 7757292 7763201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01069 1 542 MAP Kinase Kinase Kinase AT1G53570 59.601 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva10g01069 Pkinase 2.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01069 K04421 - gmx:100813122 898.656