Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01068 ATGAATGCTCATTCTCTCGCTCGCTTCCCCAATGGTGTTTACTCTAGGGCGGCTCCCATCAGGAGCCAGCAGAGTAAGGAGAATAGTATTGGAGTTGCTATTGAGGgtcataatttgaatttttcatttgcGTCAAGGCAGGCAAAAGCTGTGCCCATCCTCCGTGATTGTTCGCTTAGAATTCCTTGTGGGCAATTTTGGATGCTTCTTGGACCCAATGGATGTGGAAAATCCACACTCCTGAAGATTTTGGCTGGTCTACTCAATCCAACTTCGGGAACTCTGTATGTTAAAGTCCCCAAgacttttgtttttcaaaatccaGACCATCAgGTGGTAATGCCTACTGTTGAAGCTGATGTTGCATTTGGTCTAGGTAAGTTCAATTTGACCCGTGATGAAGTCAGATCTCGGGTCTCAAGAGCTTTGCAGGCTGTAGGCATGTCTGAATACATGCAGAGATCTGTCCAAACTCTAAGTGGTGGTCAGAAGCAGAGAGTTGCCATTGCTGGTGCCCTGGCCGAAGCTTGTAAAGTTCTGTTGATGGATGAGCTCACAACGTTTTTGGATGAAAGTGACCAGGTGGGGGTCATCAAAGCAGTTAGGAACTCTGTATATACTTCTTCTGCAGACGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTGGAGTATGCAGACGGTGCAATCTACATGGAGGACGGGAAAGTTGTCAAACATGGAGATGCAACAAGCATAAGGAGTTTCATTGAAGCCAGTTTTTCACCAGAAGGAATTAGAAGCGGAAAAGTTAAACAACCGAAGAATCTTCTTGTTAGCTCTTGCATTCAAATGAAAGAGTTGCACCATTTTCCACTTGTAAAAAACATGTA 875 0.4297 MNAHSLARFPNGVYSRAAPIRSQQSKENSIGVAIEGHNLNFSFASRQAKAVPILRDCSLRIPCGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTLYVKVPKTFVFQNPDHQVVMPTVEADVAFGLGKFNLTRDEVRSRVSRALQAVGMSEYMQRSVQTLSGGQKQRVAIAGALAEACKVLLMDELTTFLDESDQVGVIKAVRNSVYTSSADVTALWVTHRLEELEYADGAIYMEDGKVVKHGDATSIRSFIEARQSAYIKQINS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01068 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 27 263 - -
Bva10g01068 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 252 IPR027417 -
Bva10g01068 264 Gene3D - 30 263 IPR027417 -
Bva10g01068 264 CDD ABC_cobalt_CbiO_domain1 35 237 IPR015856 GO:0005524|GO:0016020|GO:0055085
Bva10g01068 264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 260 IPR003439 GO:0005524
Bva10g01068 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 27 263 - -
Bva10g01068 264 Pfam ABC transporter 54 186 IPR003439 GO:0005524
Bva10g01068 264 ProSitePatterns ABC transporters family signature. 159 173 IPR017871 GO:0005524
Bva10g01068 264 SMART AAA_5 63 237 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01068 Bva-Chr10 7752483 7755115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01068 28 262 Calmodulin-binding Proteins AT2G36910 27.559 7.82e-16 75.5