Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01065 ATGGCGTCAGAATCAGAGGCAGAGGGAAAGAGCAGAATTAAGAGTTGCAACAGAGGCCATTGGAGACCAGCCGAAGATGAGAAACTCCTACAACTCGTGAAGACGTACGGTCCCCAGAATTGGAATTTTATAGCAGAACATCTTGACAGAAGAtcagGGAAAAGCTGCAGATTGAGGTGGTACAACCAACTGGACCCAAACATCATTAAAAAGTCATTCAcagaagaggaggaagaaatGCTAGTGGCACTTCATAAGGTGAAGGGAAACAAATGGGCTGCAATTGCCAGATATTTCCCTGGAAGAACTGACAATGCCGTCAAGAATCATTTCCACGTACTAATGGCAAGAAGGAAGCGAGAAAGATTGTCACTCTTAAATGATGATAATAACATCAATTATTATGCTATAAGTGATTCCATTTCCAGCTGCAGCAGCAGCAGGAGGAGGAATTCAGGAGTTATTCTTAACTATCAAAACAAGGGCGGCAATGGCAATGCCATATTTGGTATGCCTATGCCTATGCCTCTTCCATTCGTCACAACTGAAGCTTCTTCTGCTTCAAGTGCTTATTCTTATACTCCGGCAGCGGCAGCGGCAGCTGCGTCTTTCATGCTTGGGAGTTACCACAGTTTCACAGCACCAGGAGTCCCCAGCATTGGAAAGGTTGTTCCCATTCCCTGTAAGTTTCCGGAGTCCAGTTGTGGTCACTTAAATATAATGCTGACGAGCAGTGAGCAAGAGCATCAGCATCGTCATCAATCACTTCAACAAAAGACTGTTCCCTTCATAGACTTTCTTGGTGTGGGAACTTCTTCTGCCAATTA 827 0.4341 MASESEAEGKSRIKSCNRGHWRPAEDEKLLQLVKTYGPQNWNFIAEHLDRRSGKSCRLRWYNQLDPNIIKKSFTEEEEEMLVALHKVKGNKWAAIARYFPGRTDNAVKNHFHVLMARRKRERLSLLNDDNNINYYAISDSISSCSSSRRRNSGVILNYQNKGGNGNAIFGMPMPMPLPFVTTEASSASSAYSYTPAAAAAAASFMLGSYHSFTAPGVPSIGKVVPIPCKFPESSCGHLNIMLTSSEQEHQHRHQSLQQKTVPFIDFLGVGTSSAN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01065 275 CDD SANT 21 62 IPR001005 -
Bva10g01065 275 Gene3D - 71 133 - -
Bva10g01065 275 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Bva10g01065 275 Pfam Myb-like DNA-binding domain 21 81 - -
Bva10g01065 275 ProSiteProfiles Myb-like domain profile. 17 64 IPR001005 -
Bva10g01065 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 119 IPR017930 -
Bva10g01065 275 CDD SANT 72 115 IPR001005 -
Bva10g01065 275 Gene3D - 18 70 - -
Bva10g01065 275 SUPERFAMILY Homeodomain-like 17 111 IPR009057 -
Bva10g01065 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Bva10g01065 275 SMART sant 17 66 IPR001005 -
Bva10g01065 275 SMART sant 69 117 IPR001005 -
Bva10g01065 275 PANTHER MYB PROTEIN-RELATED 11 272 - -
Bva10g01065 275 PANTHER MYB TRANSCRIPTION FACTOR 11 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01065 Bva-Chr10 7742793 7743870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01065 15 273 MYB Transcription Factor Family AT4G33450 44.231 7.44e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva10g01065 Myb_DNA-bind_6 9.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01065 K09422 - zju:107425670 206.838