Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01056 ATGAAGAAACAAGGCTGTGAGATTGAAGCAATAGGCATCAACTACAAGATCTGCACACAGAAAACAGAGCATccttttaaaatcttttgcaAAGCTCCAAAACTGaatattgaagaaaatattcaagAGGCCGATGAGGAAGGCAAGAGTCAACAAACATGCACTGGAGCCAGGCATGTTCTCAAGAACGTGAATTGCCAGGCCAAGCCATGGGAAATTCTCGCCATTGTTGGCCCTAGTGGGGCTGGAAAATCATCTGTGCTTGAGGTTTTTGCTGGTAAAGTAACCCCACAAAGTGGGTCTATTTTAGTGAACCAGAAGCCTGTCGACAAAGCTCAGTTCAAGAAGATTTCAGGGTACGTAACACAAAAGGATACTCTCTTTCCATTACTTACGGTTGAAGAAACATTGATGTTCAGTGCAAAGCTACGGCTAAATCTTGCTCAAGAACAACTATGCTCCAGGGTCAAGTCACTTATTCAGGAGCTAGGACTTAGCCATGTAGCAGGGACTCGAATTGGAGATGACAGAGTCCGTGGGATATCAGGTGGGGAGAGACGCCGTGTTTCTATTGGAGTTGAAGTCATACACGATCCCAAAGTGTTGATTCTGGATGAGCCAACTTCCGGCCTTGACAGCACCTCTGCTCTGCAAATCATCAATATGCTGAAGGTCATGGCTGATTCTCAGGGACGAACCATAATCCTTAGTATCCATCAACCTGGGTTCAGAATAGTAAAGTTGTTCAACTCAATTTTACTGTTAGCTAATGGCTCGGTTTTGCACCATGGCACTGCAGATTTACTGAGTGTGAATCTAAGGTTGATGGGCTTGGAGCTTCCTCTTCATGTTAATGTAGTTGAATTTGCCATTGACTCCATAGAAATGATTCGGCATCATCAAGAAATACCACCACAAAGACCAGTGCCAGCAATAATGCAGCAAAAGAAAGGCGATGATCAAGGCGAGAGTAGAAGTGGTAAGTTTACTCTGCAACAGCTCTTTCAACAGTCCAAAGTAATTGATGAAGAGATAATCAATGCGAGCATTGATTTCACTTATGATTTTGCAAACTCTAGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAGAACATTTATCGAACAAAGGAGCTCTTTGCATGTAGAACGATTCAGATGCTGATTTCTGGGTTAGTTTTAGGCTCCATCTTTTGTAATCTTAAGGATGATCTAGTAGGAGCTGAAGAAAGGGTCGGTCTATTTGCTTtcatattaacatttttattatcaagCACCATCGAAGCACTACCAATCTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTCTCATCCTATGCTATTGCCAATGGACTAGTTTACTTGCCATTTCTACTCATTCTAGCCATTTTATTTACAGTGCCCTTATATTGGCTTGTTGGGCTCAACCAGAACTTCACGGcctttttgcattttttgttGCTAATTTGGTTAATTCTCTACACAGCAAATTCGGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAACTCAGTTATTGCTGGTGTCATGGGATCATTCTTCTTGTTCTCTGGCTACTTCATATCAAAGCATGAAATTCCAAATTACTGGATTTTCATGCATTATATATCATTGTTTAAGTATCCCTTCGAAGGGTTTCTGATAAATGAGTTCTCCAACTCAAAGAAGTGCTTGGAGTACATGTTTGGGGCATGTATGGTGACTGGAGAGGATGTGCTTAAAGAAGAAGGATATGGGGAGGAAAGTAGCAGATGGAAGAACGTTGGGGTCATGGTGTGCTTCATCTTGTTTTACAGGTTCATTTCTTATGTAATTCTTAGATATAGATGCTCGCTAAGGGGAATCAAAAGTGTCATCATGTG 1925 0.4036 MKKQGCEIEAIGINYKICTQKTEHPFKIFCKAPKLNIEENIQEADEEGKSQQTCTGARHVLKNVNCQAKPWEILAIVGPSGAGKSSVLEVFAGKVTPQSGSILVNQKPVDKAQFKKISGYVTQKDTLFPLLTVEETLMFSAKLRLNLAQEQLCSRVKSLIQELGLSHVAGTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIINMLKVMADSQGRTIILSIHQPGFRIVKLFNSILLLANGSVLHHGTADLLSVNLRLMGLELPLHVNVVEFAIDSIEMIRHHQEIPPQRPVPAIMQQKKGDDQGESRSGKFTLQQLFQQSKVIDEEIINASIDFTYDFANSRLRETMILTHRFSKNIYRTKELFACRTIQMLISGLVLGSIFCNLKDDLVGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNQNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVMGSFFLFSGYFISKHEIPNYWIFMHYISLFKYPFEGFLINEFSNSKKCLEYMFGACMVTGEDVLKEEGYGEESSRWKNVGVMVCFILFYRFISYVILRYRCSLRGIKSVIM 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01056 641 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Bva10g01056 641 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 282 IPR003439 GO:0005524
Bva10g01056 641 Gene3D - 49 286 IPR027417 -
Bva10g01056 641 SMART AAA_5 70 259 IPR003593 -
Bva10g01056 641 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 630 - -
Bva10g01056 641 Pfam ABC-2 type transporter 364 572 IPR013525 GO:0016020|GO:0140359
Bva10g01056 641 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Bva10g01056 641 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 630 - -
Bva10g01056 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 269 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01056 Bva-Chr10 7704088 7706257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01056 59 287 Calmodulin-binding Proteins AT2G36910 24.490 1.22e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01056 K05681 - gmx:100789722 1038.48