Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01051 aTGGAAGATGAGAGCCATAGCAATTTGCCAAATGGGCTGAAAACAGAGAGCCCTGAAAGTCCATGCTTAAAGAACAACAACGGCCACAACAAAGAACAAGATCGCTTCCTTCCTATAGCAAATGTGGGTAGAATCATGAAAAAGGTGCTCCCTGGCAATGGCAAGATCTCAAAGGATGCAAAAGAGACTGTTCAAGAATGTGTATCAGAGTTCATCAGCTTTGTTACTGGGGAAGCATCAGACAAATGtcaaagagaaaagaggaagaCTATCAATGGAGATGATATCATATGGGCCATCACAACCTTAGGCTTTGAGGATTATGTGGAGCCACTTAAAACCTACCTTCAAAAATATAGAGAGATAGAAGGAGAGAAGCTTAATATTCCAAAGCAACAGCGTTCTGAACAAAGGCTACATCAACAGCCACAACAACATCACCACGTTCAAGACCATAAtcataataacaataacatacCCTTAAATACTGTATATTCTTCAACAAATCTCATTTCTCAGCCCCCCTACGTGCCCACGGATCAGTCATTTTCCCTACCATTCTCCCCAAATTCAATCCAGAAACAGCTACAGCCACAAGACCAGATCGATTCAGTGGGGCATTGGTA 626 0.3994 MEDESHSNLPNGLKTESPESPCLKNNNGHNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVEPLKTYLQKYREIEGEKLNIPKQQRSEQRLHQQPQQHHHVQDHNHNNNNIPLNTVYSSTNLISQPPYVPTDQSFSLPFSPNSIQKQLQPQDQIDSVGHW 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01051 208 ProSitePatterns NF-YB/HAP3 subunit signature. 67 83 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva10g01051 208 MobiDBLite consensus disorder prediction 181 202 - -
Bva10g01051 208 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
Bva10g01051 208 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Bva10g01051 208 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Bva10g01051 208 MobiDBLite consensus disorder prediction 181 208 - -
Bva10g01051 208 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 1 198 - -
Bva10g01051 208 MobiDBLite consensus disorder prediction 132 163 - -
Bva10g01051 208 MobiDBLite consensus disorder prediction 10 27 - -
Bva10g01051 208 Gene3D Histone, subunit A 24 159 IPR009072 GO:0046982
Bva10g01051 208 SUPERFAMILY Histone-fold 33 150 IPR009072 GO:0046982
Bva10g01051 208 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 100 IPR003958 -
Bva10g01051 208 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 198 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva10g01051 208 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01051 Bva-Chr10 7682921 7683650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01051 12 208 CCAAT-HAP3 Transcription Factor Family AT2G13570 65.550 2.23e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva10g01051 CBFD_NFYB_HMF 1.4e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01051 K08065 - gmx:100778216 313.538