Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01046 ATGAAGTTGATCGGAGACCGGAGCATCACAAATGATGTCACCGGCGATGGCCAGCAAGGTCGGACGGTCTTGGTTGGAGTAAAGTTGGATCCCCGAAGCCGGGAATTGCTGACATGGGCTCTTGTCAAGGTGGCTGAATCTGGTGACCTCGTAATTGCTCTTCACGTCCTCGACACCATAACCgAGGGAACAGCATCGCTTCTCTCTCTTGTAAAGACTTTCGATTCCGTTCTCGCTGTATATGAAGGTTTCTGTAATTTAAAGCAGGTTGATCTAAAACTCAAAGTATGTAGAGGTGCGTCGGTTCAGAAACTCCTAGTACAACAGGCAAAATCATGTGGTGCCACGACCGTAATTGTGGGAACTTCTAAAACGCATCACGCGATCCGGTCAACGGCATCTGTTGCCAAGTACTGTGCTAGAAAATTGCCCAAATATTTTTCTGTCTTGGCGGTTGATAATAGCAAGGTTGCATTCCACAGGGAAGCTGCTGAAATAAGTGCTGATAAAGtaaaattaaatgaaggcTCAATATTGTCGCGAAAATCCTTCTCAGCATATTCTAAGAAGAATCTTAGGAATTGTGAAAGTTGTGCACAGTTGACTGCTCTGCaagaaaattctgcaattGAACTTACGCTAGTATTATCTGATgatcatgaaaaagaaaaatcattggcATTGGTACCAATCCAAAAGCTTGAtgatgtttcaaaattttcaatagtggttcaagaatcaaaccaatCAAAGCCTGCTTGGTCACGCCTCCACCATGCATTTCTGCCCAAAAAGCAGACGCAGAAGTCTTTCATGAGAAATACATCTATTTTTCAACAAGCAATAAGACAACCAAGCTGGCATTCTTCTGCTTTGGTCCATCCAGATCATAAACAGACTAATATTAAACAGGATGATGATTCCACCCTTTATGGGGATAGAGGTGCCATGGTGCCGCTTGGATCTGATTCTATTGCTCCTCCTCTTTGTAGAGACTTGATAGGACTTCCCAAAGAATTGTTGGGTTTACTAGAGAAGTACTCATCTTCATGCAGATTTTATGGTTTTCAAGAACTTGTATCTGCAACTGCTAACTTCTTGCCTGAAAATTTGGTTGGCAAAGGTGGCAGTAGTCATGTATACAGAGGACGTCTTTTAGATGGCAAGGAAGTGGCAGTGAAAGTTTTGAAGCCATCTCAAGATTCGGTAAAAGAGTTTGTTCAGGAAATTGAGATAATTGGGACTTTGCATCACAAGAACATAATATCTCTCTCTGGGTTCTGTTTTGACGACAGCAATTGTCTAttggtttatgattttttatcaaGAGGAAGCCTAGAAGAGAATCTTCATGTTGATAAGGACTGTAACGCATTTGGTTGGCGAGAGAGGTACAAGGTGGCTTTGGGTATTGCTGAGGCAGTGGACTACCTGCATAATGGTTCTGATCAGGCTGTGATCCATAGGGATGTGAAATCTTCAAACATCCTTCTTTCAGATGATTTTGAACCTAAGCTCTCAGATTTTGGACTTGCTAGTTGGGGTTCTTCTGCATCCCATAATGCTATTACTGACGTAGCAGGGACCTTTGGTTACATTGCTCCTGAATACGTTATGCACGGTAAAGTAACTGACAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTTTCAAGTAGGAAGCCAATTAACAATGAATGTCCAAAGGGCCAGGAGAGTATTGTGATGTGGGCAACACCAATTCTGAAGAGTGGCAAGCTTTCTGAATTGCTTGATCCATGCCTAGGCAGTGATTACGACTATTGTCAGATTGAAAGAATGGTTTTGGCTGCCACTCTTTGCATTAGACGAGCACCTAGACTGCGACCACAAATCAGCCTGATATTGAAACTTCTGAATGGTGATGAAGAAGTGACATCATGggcaaaacaagaaattagTGTAGCAGAAGAGCTTGACAGACTTGATGGGGAACCAGTCCCAACCAATATTCAGTCCCATTTGTGCCTCGCATTGCTAGACTTGGAGGATGATATACATTCTATCAGTAGCACTGAACAGACTGTCTCATTGGAGAACTATTTGCAAGGAAGATGGAGTCGATCATCAAGTTTTGACTA 2129 0.4025 MKLIGDRSITNDVTGDGQQGRTVLVGVKLDPRSRELLTWALVKVAESGDLVIALHVLDTITEGTASLLSLVKTFDSVLAVYEGFCNLKQVDLKLKVCRGASVQKLLVQQAKSCGATTVIVGTSKTHHAIRSTASVAKYCARKLPKYFSVLAVDNSKVAFHREAAEISADKVKLNEGSILSRKSFSAYSKKNLRNCESCAQLTALQENSAIELTLVLSDDHEKEKSLALVPIQKLDDVSKFSIVVQESNQSKPAWSRLHHAFLPKKQTQKSFMRNTSIFQQAIRQPSWHSSALVHPDHKQTNIKQDDDSTLYGDRGAMVPLGSDSIAPPLCRDLIGLPKELLGLLEKYSSSCRFYGFQELVSATANFLPENLVGKGGSSHVYRGRLLDGKEVAVKVLKPSQDSVKEFVQEIEIIGTLHHKNIISLSGFCFDDSNCLLVYDFLSRGSLEENLHVDKDCNAFGWRERYKVALGIAEAVDYLHNGSDQAVIHRDVKSSNILLSDDFEPKLSDFGLASWGSSASHNAITDVAGTFGYIAPEYVMHGKVTDKIDVYAFGVVLLELLSSRKPINNECPKGQESIVMWATPILKSGKLSELLDPCLGSDYDYCQIERMVLAATLCIRRAPRLRPQISLILKLLNGDEEVTSWAKQEISVAEELDRLDGEPVPTNIQSHLCLALLDLEDDIHSISSTEQTVSLENYLQGRWSRSSSFD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01046 709 CDD USP_Like 22 152 - -
Bva10g01046 709 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 703 - -
Bva10g01046 709 Gene3D HUPs 6 152 IPR014729 -
Bva10g01046 709 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 144 - -
Bva10g01046 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Bva10g01046 709 SUPERFAMILY Protein kinase-like (PK-like) 347 638 IPR011009 -
Bva10g01046 709 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Bva10g01046 709 Pfam Universal stress protein family 21 145 IPR006016 -
Bva10g01046 709 Pfam Protein kinase domain 370 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01046 709 Gene3D Phosphorylase Kinase; domain 1 341 440 - -
Bva10g01046 709 Gene3D Transferase(Phosphotransferase) domain 1 441 655 - -
Bva10g01046 709 CDD STKc_IRAK 372 637 - -
Bva10g01046 709 PANTHER OS01G0253100 PROTEIN 17 703 IPR045271 GO:0004714|GO:0006468
Bva10g01046 709 ProSiteProfiles Protein kinase domain profile. 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01046 709 SMART serkin_6 366 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01046 Bva-Chr10 7640289 7643935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01046 354 641 Trihelix Transcription Factor Family AT1G70460 41.980 1.30e-70 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva10g01046 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01046 - - gmx:100815722 967.992