Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01043 ATGTCTGGAAAGGGCAAAAGGAAGGACGAGCAAGACTACGCTTCCGACGGCGACCCCGACGGTCACATGCCTCATAAAAAATCCGCGAAGAAAGACTCCGATGACTCTGACGGCATGGTCGTCTGCGAGATATCGAAGAATAGGAGGGTCTCGGTGAGGAATTGGCAGGGAAACATTGTGGTAGATATTCGGGAGTTTTACATTAAAGATGGGAAGCAAATGCCTGGCAAGAAAgGTATCTCGTTGAGCATGGATCAgTGGAATGTGCTTCGGAATCATGTTGAAGAAATTGATAAGGCAGTTAATGAGAGTTCTTA 317 0.4637 MSGKGKRKDEQDYASDGDPDGHMPHKKSAKKDSDDSDGMVVCEISKNRRVSVRNWQGNIVVDIREFYIKDGKQMPGKKGISLSMDQWNVLRNHVEEIDKAVNESS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01043 105 Gene3D Transcriptional Coactivator Pc4; Chain A 31 105 IPR009044 GO:0003677|GO:0006355
Bva10g01043 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Bva10g01043 105 MobiDBLite consensus disorder prediction 1 39 - -
Bva10g01043 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 103 IPR045125 GO:0003713|GO:0060261
Bva10g01043 105 PANTHER BNAC09G47220D PROTEIN 1 103 - -
Bva10g01043 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01043 Bva-Chr10 7612661 7614819 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Bva10g01043 PC4 5.2e-24 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01043 K25815 - mnt:21391299 164.081